Pairwise Alignments

Query, 517 a.a., proton/peptide symporter family protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 493 a.a., dipeptide permease DtpD from Escherichia coli ECRC98

 Score =  102 bits (255), Expect = 2e-26
 Identities = 107/430 (24%), Positives = 180/430 (41%), Gaps = 53/430 (12%)

Query: 9   PKQIPYIIASEACERFSFYGMRNILTPFLMTALLLSVPEHLRAGEAKDVFHSFVIGVYFF 68
           P+ I Y++A +  E FSFYGMR +L  +L   L  +         A ++F ++   VY  
Sbjct: 8   PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYNDTH------AYELFSAYCSLVYVT 61

Query: 69  PLLGGWIGDRLFGKYNTILWLSLLYCVGHAFLAIFEDSKTGFYTGLFLIALGSGGIKPLV 128
           P+LGG++ D++ G    ++  +LL  +GH  L   E   +  Y  L +I  G G  K  V
Sbjct: 62  PILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNV 121

Query: 129 SSFMGDQFDQSNKSLAQKAFDMFYFTINFGSFFASLSMPLLLKHFGAAVAFGIPGVLMFI 188
           S  +G+ ++ ++       F + Y   N GS  A ++     + +  A+ FG+  V M  
Sbjct: 122 SCLLGELYEPTDPR-RDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIA 180

Query: 189 ATVFFWAGRHRYVHMPPEPKNPNGFLPVIKTALLSPGANRFGLALALMGTVLAVIALGFM 248
             V F  G   + H     K       +  T  L P    +G  L L+    A+I + F 
Sbjct: 181 GLVIFLCGNRHFTHTRGVNKK-----VLRATNFLLP---NWGWLLVLLVATPALITVLFW 232

Query: 249 PSLGLVTSLCLALVLLMGFVGS---GASMQLDRARARHGDEAVEGVRAVMRILVLFALVT 305
                V +L +A ++ +G +      A  Q  R   R           ++  L  F+++ 
Sbjct: 233 KEWS-VYALIVATIIGLGVLAKIYRKAENQKQRKELR-----------LIVTLTFFSML- 279

Query: 306 PFWSLFDQKASTWILQANEMTKPEWF----EPAMMQALNPLLVMILIPFNNFVLYP---- 357
            FW+   Q  S+  L  +     + F      AM Q++N   VM+   F  +V+      
Sbjct: 280 -FWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAG 338

Query: 358 --TLERWGFRLTALGKMASGIAFSGLS--WVVIGSIQLMMDGGSAVSIVWQVLPYALLTF 413
             T+  WG     LG M++G     LS  W         M G S++ ++  VL  A++ F
Sbjct: 339 NRTVRIWGKFALGLGLMSAGFCILTLSARWSA-------MYGHSSLPLM--VLGLAVMGF 389

Query: 414 GEVLVSATGL 423
            E+ +    +
Sbjct: 390 AELFIDPVAM 399