Pairwise Alignments

Query, 530 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

Subject, 681 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  192 bits (487), Expect = 4e-53
 Identities = 118/344 (34%), Positives = 188/344 (54%), Gaps = 5/344 (1%)

Query: 187 VVETLVLVVMAKNLHRQAEVSFDIQAVAHHLTGEQIDLTHRTNASNNPQSLAFNGFLDH- 245
           +V  LV +  A  + RQ  V  +   +A     +  DLTH ++ +   +       + H 
Sbjct: 337 LVVLLVGIFAAFLITRQITVPLNSTVIAARRIADG-DLTHDSSTTRQDELGLLQNTMQHM 395

Query: 246 ---LQGMVGRMASTGDKLTQLSNRLHDSMSGVNNRMKLQHNQIDVIAHAVGNVSDAVRLI 302
              L+G++G + +   ++   + +L       +  + LQ N++D +A A+  ++  V+ +
Sbjct: 396 TVSLRGLIGGIGNGVTQIATAAEQLSAVSEQTSAGVTLQKNEVDQVATAMNEMASTVQEV 455

Query: 303 SDNANDASAAVSDADAKSRDGSALSRKTLDEVLTLANAIERAADASGRLAEDSKSIGKVL 362
           + N  DAS A   A  ++  GS++ +    E+  LA  +++  +A  RL EDS  IG V+
Sbjct: 456 ARNTEDASQAAKQASERAAHGSSVVQHATREIGQLAGEVQQLGEAMQRLTEDSGKIGSVI 515

Query: 363 DVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASKTQQSTEEIHNMIQRLQ 422
           DVIK++AEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLA +TQ ST EI  +IQ LQ
Sbjct: 516 DVIKAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQNSTTEIEALIQALQ 575

Query: 423 ARSDDAVNAMSTSQTSVTQCVAFTQQTDERLGQVRQSLQQIVEISSQIASSTTEQMQAIG 482
             +  A   M  S       V   +Q ++ L ++ QS+  I ++S QI+++  +Q     
Sbjct: 576 KGTGAASGLMDASLQRTEGTVVLARQAEQALVEINQSIGTIEQMSQQISAAAEQQSAVTE 635

Query: 483 EISQNALSIRQLSDDNNHELDRVVDEVAEATGLAGLIHSDMKRF 526
           EI+++ LS+R ++D +    ++      E   L   + S + RF
Sbjct: 636 EINRSVLSVRDIADQSASATEQSAASTVELARLGSDLQSMVARF 679