Pairwise Alignments

Query, 866 a.a., TonB-dependent receptor (RefSeq) from Shewanella amazonensis SB2B

Subject, 903 a.a., Vitamin B12 transporter BtuB from Pseudomonas sp. DMC3

 Score =  285 bits (730), Expect = 7e-81
 Identities = 253/894 (28%), Positives = 389/894 (43%), Gaps = 82/894 (9%)

Query: 25  AADDDKAISAES-------KLEKIQITGSRLKGVDMEGANPLQSFDQEELVKRGYDTIAE 77
           A DD  A  A +       +L+++++TGS ++ VD E A P+     EEL K+G  T AE
Sbjct: 40  AEDDSSATPAAAVVAAPTTQLQRVEVTGSAIRRVDAETAVPITILKAEELRKQGVTTTAE 99

Query: 78  FLKDLPQAASAGTFTETGGVGGADGAPAGAAGVSLRGLGSSSTLVLVNGRRVAVDSFS-- 135
            ++ +  + S       G VG A G   GA+   +RG+G++ TLVL+NGRR+A ++ S  
Sbjct: 100 LVQRITGSQSINN--SAGSVGAATG---GASFADMRGIGANKTLVLLNGRRLANNALSGT 154

Query: 136 NGSDSFVNVNAIPMAAIERIDVLTDGASSIYGSDAIAGVINFILRKDFVGHELTAQYGND 195
           N +   V++N IP AAIER++VL DGAS++YG+DAI GVINFI +K      LT   G +
Sbjct: 155 NSAGGAVDLNMIPFAAIERVEVLRDGASALYGTDAIGGVINFITKKSLTDGALTL--GGE 212

Query: 196 TSDHDASRTGLTYA-----GGFATDNTNTTVVLDYAKRNAIFNSDRPIKVTYT------S 244
           T  H         +     G    D  N   V +Y K+  +  +DR     Y        
Sbjct: 213 TPTHSGGGATKDMSASWGYGDLEEDRFNVLGVFNYNKQQNLDANDRSFATDYAPGRGLDQ 272

Query: 245 YTEMVIDGNYYAEDWCGDDTR-WGGEACNYDYVIQRA------------IQPDFENLGAT 291
            +     GNY      G+ T       CN   +I R             + P  E     
Sbjct: 273 TSGTAFPGNYSQN---GNATNPLANSNCNGPNLIARDGLCRFSTREFIDLVPQTEKTSFF 329

Query: 292 LNHQWQLDNDMTFFAEAMYQQNTGHAYEAPAGYT-VTVPGDAAYVPGY----VRDINAAD 346
                +L +D     E  + +N       PA  T +++   + Y PG          A D
Sbjct: 330 GKTTAKLGDDHNANLEYFWSRNNNAVAVGPAPLTGLSLDSSSPYYPGNGITPAPTDFALD 389

Query: 347 GDDSNSIRVRTRMPERRIQEYDTESYRVLAGLRGEWGDWGWESAASYGKSTNEVTHVAGY 406
                 +  R      R  +    S R L    G  G W +   ASY ++    +  +GY
Sbjct: 390 PTQPVDVNWRETAAGPRESKDQNTSQRFLLSFDGLVGGWDYNVGASYNQNKIVSSVTSGY 449

Query: 407 MNRDALADAIASGSFNPFNLGMDNSEEAI-AALRDSAIRRGESEVMSLDANISGELFE-M 464
           ++  A+ D +ASG  NPF       ++ I AA    A       V   D  +S E+ +  
Sbjct: 450 VSDQAMIDGLASGLLNPFGPQTAAGQQYIDAAAYHGAYSTAVGRVAGFDGRVSREIGDWF 509

Query: 465 DAGLVSAVFGAELRSEEIVDNPAASAVNDDVIGLG-ASDAAADRTQYALYGEINLPLFEG 523
            AG      G E R E+   +  + A +   +G+  A     DR+  A Y E+N+P+ + 
Sbjct: 510 GAGPSGLALGGEYRKEKFHQDFESFAGDIQSLGIDPAGSVEGDRSVKAAYAELNVPVLDS 569

Query: 524 LDLITALRYDHYSDFGGDINPKVSLRYKATDDLVLRASWSTGFRAPSLSQLGAGTSLG-- 581
           L+L  A+R+D YSDFG   NPK S RY+   +LV+R ++S GFRAPSL +L +  S+   
Sbjct: 570 LELSAAVRHDKYSDFGSTTNPKYSFRYQPLKELVVRGAYSEGFRAPSLYELYSPRSITFT 629

Query: 582 ----SQYINCGAG--EPFNALCGTNGAIDGELEFDQETIGNKGLDAESSEAINAGLSWNL 635
               +  + C  G  +P     G NG  D   +F  +  GN+ L  E +  +  G  +  
Sbjct: 630 QGFYNDPVLCTGGVVQP-----GGNGGRDCGQQFLNQIGGNEDLAPEKARNVTLGFVYQP 684

Query: 636 TDNWQLTVDYWRYDHEDIVDIDASTTLNACVKGTAPVVGSVSELKGEFGCVIDGNGDISF 695
             N  + +D+W         I  S  +    + T  V          F  V + +G +++
Sbjct: 685 ISNLSVGLDFWW--------IHISNQIQPFPEST--VFDQAGAYPDRF--VRNADGTLNY 732

Query: 696 LRTGYFNVGSQTTDGLDYRMTYRLETAAAGEFSFYVSGTETFSFERQVTPDADVEDLLGR 755
           + TG  N+G   T+G+D  + YR      G+F   + GT    ++ Q T      D +G 
Sbjct: 733 IVTGNANLGIVETNGVDVSLDYRFPNTPYGQFGLGLQGTYVDEYDFQSTIKGPFTDKVGD 792

Query: 756 LSGANEIARPERVLDAGTDWSLGDWSASLSAHYVSSMGDGDFRFDNETVDSWLTFSASVG 815
             G   IAR +  L     WSLG   A+L+  + +   D D R  +  V S+  +  S G
Sbjct: 793 FQGDGVIARWKHNLTG--SWSLGAARAALTNRFTTGYNDYD-RDTHSRVASYSVWDLSAG 849

Query: 816 VTLMENHSLMLSVRNLTDEEPPYASSPTN---GYASSAHDWLGQRWNLRYSLRF 866
            T  +   +   ++N+ D  PP+++   N   GY     D LG+    R +  F
Sbjct: 850 YTFNKVLDVDAGMKNVFDRNPPFSNQAYNFQSGYDPRYTDPLGRTLFARMTYHF 903