Pairwise Alignments

Query, 479 a.a., transporter, putative (RefSeq) from Shewanella amazonensis SB2B

Subject, 580 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 47.8 bits (112), Expect = 1e-09
 Identities = 68/295 (23%), Positives = 112/295 (37%), Gaps = 31/295 (10%)

Query: 39  ITLVAETGFWTDYLQTKMLPAFTRQTGIEVKVVSTQLDDMFNLQQASLRMAKGEFDLLSM 98
           I +V+ET    +Y    +  AF+  TGI++     Q  D+    Q  ++  K  +D    
Sbjct: 73  INVVSETLTTHEYESKVLAKAFSEITGIKLTHDLLQEGDVVEKLQTQMQSDKNIYD---- 128

Query: 99  EAGWAKEWAANGYTV---PLEELAGLYDPGGTKAMSRYLE-PYYPSLLSILSYRGEVHAI 154
             GW  +    G        E +  L    G    S  L+   +  +    +  G+++ +
Sbjct: 129 --GWVNDSDLIGTHFRYGKTESITDLMANEGKDFTSPTLDIKDFIGISFTTAPDGKIYQL 186

Query: 155 PYNNYVMGNHFRRDLFENADEQKHFLERYGYPLKAPDTLVQLKDIAEFFTRKPGDVLAGK 214
           P   +     FR D FE  + +  F E+YGY L  P      +DIA+FF+    ++   +
Sbjct: 187 PDQQFANLYWFRADWFERPELKAKFKEKYGYDLGVPVNWSAYEDIAKFFSEDVKEIDGKR 246

Query: 215 LLKQPFYGVALMSGNKPHINDEFSAILWSM---GDRWF---TPVYEDNGRLNH-----FE 263
           +     YG        P +   F+   +SM   GD+      PV E   R+         
Sbjct: 247 VYGHMDYG-----KKDPSLGWRFTDAWFSMAGGGDKGLPNGLPVDEWGIRVEDCHPVGSS 301

Query: 264 VSRNLDKKLQVA-----NYYQSIKPFAIPADDAFAFNEAADALANGRVAMWPFAY 313
           V+R  D     A      Y   +K +A P      F+E+    + G +A   F Y
Sbjct: 302 VTRGGDTNGPAAVYATQKYVDWMKAYAPPEAAGMTFSESGPVPSQGNIAQQIFWY 356