Pairwise Alignments

Query, 479 a.a., transporter, putative (RefSeq) from Shewanella amazonensis SB2B

Subject, 579 a.a., putative Sugar ABC transporter, periplasmic sugar-binding protein from Pseudomonas putida KT2440

 Score = 50.1 bits (118), Expect = 2e-10
 Identities = 68/296 (22%), Positives = 112/296 (37%), Gaps = 33/296 (11%)

Query: 39  ITLVAETGFWTDYLQTKMLPAFTRQTGIEVKVVSTQLDDMFNLQQASLRMAKGEFDLLSM 98
           I +V+ET    +Y    +  AF+  TGI++     Q  D+    Q  ++  K  +D    
Sbjct: 72  INVVSETITTHEYESKVLAKAFSEITGIQLTHDLLQEGDVVEKLQTQMQSDKNIYD---- 127

Query: 99  EAGWAKEWAANGYTVPLEELAGLYDPGGTKAMSRYLEPY-----YPSLLSILSYRGEVHA 153
             GW  +    G      ++  + D    +  + Y  P      +  +    +  G+V+ 
Sbjct: 128 --GWVNDSDLIGTHFRYGKVESITDLMANEGKA-YTSPTLDLKDFIGISFTTAPDGKVYQ 184

Query: 154 IPYNNYVMGNHFRRDLFENADEQKHFLERYGYPLKAPDTLVQLKDIAEFFTRKPGDVLAG 213
           +P   +     FR D FE  + +  F E+YGY L  P      +DIA+FFT    ++   
Sbjct: 185 LPDQQFANLYWFRADWFERPELKARFKEKYGYELGVPVNWSAYEDIAKFFTEDVKEIDGK 244

Query: 214 KLLKQPFYGVALMSGNKPHINDEFSAILWSM---GDRWF---TPVYEDNGRLNH-----F 262
           ++     YG        P +   F+   +SM   GD+      PV E   R+        
Sbjct: 245 RVYGHMDYG-----KKDPSLGWRFTDAWFSMAGGGDKGLPNGLPVDEWGIRVEDCHPVGS 299

Query: 263 EVSRNLDKKLQVA-----NYYQSIKPFAIPADDAFAFNEAADALANGRVAMWPFAY 313
            V+R  D     A      Y   ++ +A        F+EA    A G +A   F Y
Sbjct: 300 SVTRGGDTNGPAAVYATQKYVDWMRAYAPKEAQGMTFSEAGPVPAQGNIAQQIFWY 355