Pairwise Alignments

Query, 479 a.a., transporter, putative (RefSeq) from Shewanella amazonensis SB2B

Subject, 580 a.a., ABC transporter substrate-binding protein from Paraburkholderia sabiae LMG 24235

 Score = 59.7 bits (143), Expect = 3e-13
 Identities = 111/483 (22%), Positives = 168/483 (34%), Gaps = 63/483 (13%)

Query: 39  ITLVAETGFWTDYLQTKMLPAFTRQTGIEVKVVSTQLDDMFNLQQASLRMAKGEFDLLSM 98
           + +V+ET     Y    +  AFT  TGI VK    Q  D+    Q S++  +  +D    
Sbjct: 72  VHVVSETIDTHMYESKTLAKAFTEITGIPVKHDIIQEGDVVEKLQTSMQSGQSIYDGWIS 131

Query: 99  EAGWAKEWAANGYTVPLEELAGLYDPGGTKAMSRYLEPYYPSLLSILSYRG--------- 149
           ++         G  VPL +    Y  G  K    Y  P     L +  + G         
Sbjct: 132 DSDLIGTHYRYGVIVPLSD----YMTGEGK---EYTNPG----LDLKDFIGTSFTTAPDK 180

Query: 150 EVHAIPYNNYVMGNHFRRDLFENADEQKHFLERYGYPLKAPDTLVQLKDIAEFFTRKPGD 209
           +++ +P   +     FR D F   D Q  F  +YGY L  P      +DIA+FFT     
Sbjct: 181 KLYQLPDQQFANLYWFRADWFARKDLQDKFKAKYGYDLGVPVNWSAYEDIADFFTNDVKT 240

Query: 210 VLAGKLLKQPFYGVALMSGNKPHINDEFSAILWSMG-------------DRWFTPVYEDN 256
           +   K+     YG        P +   F+    SM              D W   V  D 
Sbjct: 241 IDGEKVFGHMDYG-----KKDPSLGWRFTDAWLSMAGEADKGIPNGIPVDEWGIRVTPDG 295

Query: 257 GRLNHFEVSRNLDKKLQVA-----NYYQSIKPFAIPADDAFAFNEAADALANGRVA---M 308
                  VSR        A      Y   +K +A P      F+EA    A G++A    
Sbjct: 296 CHPVGASVSRGGGTNSPAAVFATTKYVDWLKKYAPPEASGMTFSEAGPVPAQGKIAQQIF 355

Query: 309 WPFAYNNLWLKSAVVEKKVEGARLDVAQVAGGKPY-----------VGAYAFAVSYDSRN 357
           W  A+    LK   V       +  +A    G PY           VG++ F  S  +  
Sbjct: 356 WYTAFTASMLKPGNVTNADGTPKWRMAPSPHG-PYWKDGMQNGYQDVGSWTFFKSTPANQ 414

Query: 358 PEAAYWLLKYMGSFQAQYDYAMGGGNPCRIDVATHTDFQAPGLKAIGGAF-MASHQANLA 416
             AA+   +++ S       ++ G    R D   H+D+        GG        A +A
Sbjct: 415 RAAAWLYAQFVTSKTVSLKKSIVGLTFIR-DSDIHSDYFTKNADKYGGLIEFYRSPARVA 473

Query: 417 WAGDIRTMGHFTSSVMGQIYPELAKTCFAVSRQPSHA-GQYFTELNQTILRLQNSQGETA 475
           W      +  +    M Q++ +   T  A  + P  A      E++Q + RLQ +  +  
Sbjct: 474 WTPTGNNVPDYPK--MAQLWWKNVATAAAGEKTPQAAMDNLAKEMDQVLGRLQRAGMKVC 531

Query: 476 AME 478
           A E
Sbjct: 532 APE 534