Pairwise Alignments

Query, 488 a.a., GTP-binding protein EngA (RefSeq) from Shewanella amazonensis SB2B

Subject, 539 a.a., ribosome biogenesis GTPase Der from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  300 bits (768), Expect = 8e-86
 Identities = 175/461 (37%), Positives = 266/461 (57%), Gaps = 27/461 (5%)

Query: 5   VALVGRPNVGKSTLFNRLTRTRDALVADYPGLTRDRKYGRAHLSGYEFIVVDTGGI-DGT 63
           VA+VGRPNVGKSTLFNRL   R ALV D PG+TRDR+Y   ++   +  ++DT G  D T
Sbjct: 5   VAIVGRPNVGKSTLFNRLVGKRLALVDDRPGVTRDRRYADGNIGDMDLTLIDTAGYEDVT 64

Query: 64  EEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLAIAQHLRSRDKITFVVANKVDGI 123
           ++ +E +M EQ+ AA+++A++V+FM DAR G+T+ D   A+ LR   K   ++ANK +  
Sbjct: 65  DDSLEARMREQTEAALDDAELVMFMMDAREGVTSLDRIFAERLRRVHKPVILLANKSESR 124

Query: 124 DADSACGEFWQLGLGEVYQMAAAQGRGVTGLVEYALAPFAEAMGLVRDDDGEVVTDERNY 183
           ++    GE   LG GE   ++A  G G+  L  YA                 V   +  +
Sbjct: 125 ESGGGVGEAHALGFGEPVAISAEHGEGMADL--YAAI---------------VAASQDIF 167

Query: 184 TEEEAEAEQQRLAEQPIKLAIIGKPNVGKSTLTNRILGEERVVVYDQPGTTRDSVYIPME 243
            EE  E ++      PI++A+IG+PN GKSTL NR++G++R++   + G TRDS+ +  +
Sbjct: 168 VEEIDEPDK------PIRIAVIGRPNAGKSTLINRLIGDDRLLTGPEAGITRDSISVDWQ 221

Query: 244 RDGRNYVLIDTAGVRRRARVHEVIEKFSVIKTLKAVEDSNVVLLVIDAHEGIAEQDLGLL 303
            +G+N  L+DTAG+RR+ARV E +EK SV  T++A+  + VV+L++D  +    QDL L 
Sbjct: 222 FEGKNIRLVDTAGMRRKARVQEKLEKLSVADTIRAITFAEVVILMMDKDDAFDTQDLQLA 281

Query: 304 GFVLNSGRALVLAVNKWDGLD--QDVKDRVKTELDRRLGFIDFARIHFISALHGTGVGHL 361
             V   GRALV   +KWD  D  Q    ++K   + +L  +  +    +S+  G GV  L
Sbjct: 282 DLVEREGRALVYVASKWDLEDEPQSRMAKLKGMAEDKLPQLKGSPFVALSSHSGRGVERL 341

Query: 362 FESIEEAYDSATRRVSTSMLTRIMQMAQDDHQPPMVNGRRVKLKYAHVGGYNPPIVVVHG 421
             ++ +AYD+ + +V T  L   + MA   H PP V+G+R+K KY       PP  V+  
Sbjct: 342 MPAVLQAYDTWSVKVKTKDLNTWLSMATQRHPPPAVDGKRIKPKYIAQTKARPPTFVLMA 401

Query: 422 NQVSRLPDSYKRYMMNYYRRALKVVGTPIQLRF-HEGDNPF 461
           N+   +P+ YKRY++N  R +  + GTPI+L     G NP+
Sbjct: 402 NRAESMPEHYKRYLVNSIRESFDLPGTPIRLNVKSSGVNPY 442



 Score = 73.9 bits (180), Expect = 1e-17
 Identities = 53/169 (31%), Positives = 83/169 (49%), Gaps = 9/169 (5%)

Query: 200 IKLAIIGKPNVGKSTLTNRILGEERVVVYDQPGTTRDSVYIPMERDGRNYVLIDTAGVRR 259
           +K+AI+G+PNVGKSTL NR++G+   +V D+PG TRD  Y        +  LIDTAG   
Sbjct: 3   LKVAIVGRPNVGKSTLFNRLVGKRLALVDDRPGVTRDRRYADGNIGDMDLTLIDTAGY-- 60

Query: 260 RARVHEVIEKFSVIKTLKAVEDSNVVLLVIDAHEGIAEQDLGLLGFVLNSGRALVLAVNK 319
                + +E     +T  A++D+ +V+ ++DA EG+   D      +    + ++L  NK
Sbjct: 61  EDVTDDSLEARMREQTEAALDDAELVMFMMDAREGVTSLDRIFAERLRRVHKPVILLANK 120

Query: 320 WDGLDQDVKDRVKTELDRRLGFIDFARIHFISALHGTGVGHLFESIEEA 368
                   + R           + F     ISA HG G+  L+ +I  A
Sbjct: 121 -------SESRESGGGVGEAHALGFGEPVAISAEHGEGMADLYAAIVAA 162