Pairwise Alignments

Query, 638 a.a., flagellar hook-associated protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 564 a.a., flagellar hook-associated protein FlgK from Pectobacterium carotovorum WPP14

 Score =  172 bits (436), Expect = 4e-47
 Identities = 127/455 (27%), Positives = 207/455 (45%), Gaps = 32/455 (7%)

Query: 4   DLLNIARTGVLASQAQLGVTSNNIANVNTEGYNRQVATQATHLSQRSGNSFYGTGTYVSS 63
           +L+N A +G+  +Q  L   SNNI+N    GY+RQ A     +S  +   + G G  V S
Sbjct: 3   NLINTAMSGLKGAQVALSTVSNNISNQAVIGYSRQNAILEQAISSSTSAGYIGNGVNVVS 62

Query: 64  VKRVYNEYAARELRIGQTAKGAAEVSHTKMSELDQLFSQIGKAIPQSLNDMFKNINSLAD 123
           + R YNE+   +LR  QT   +    + ++S++D L +    ++  ++   F N+ +L  
Sbjct: 63  INRQYNEFITNQLRAAQTTSSSVSAYYEQISKIDNLLASSTTSLSSTIQGFFSNLQNLTS 122

Query: 124 LPSDLGIRGGVLGSAQQMASAINEMQRQLEGQMKQTHEQIDAITTRVNEISTELANINRE 183
              D   R  VLG A+ + +      + L       + QI +I   VN  + ++A++N E
Sbjct: 123 NAGDSSTRQTVLGKAEGLVNQFKVTDKYLRDMDSGLNTQIQSIVGLVNTHTDQIASLNNE 182

Query: 184 LMKTMGEDM-----QLLDKQDALIMELSEYAQVNV---------IPLENGAKSIMLGGAV 229
           + K MG +       LLD++D L+ +L++   V+V         + L+NG   +  G + 
Sbjct: 183 ITKLMGANSGTMPNDLLDQRDVLVDQLNKLVGVDVTVQDGIVYNVALKNGTNLVQAGTSN 242

Query: 230 MLVSAEVAMSMGTAQGDPYSDELRLTATTGSSTLVVDPSKLGGQLSALYEFRDKTLIPAE 289
            LV A  + +  T     Y D+     +   STL       GG L  L  FR +TL  A 
Sbjct: 243 ELV-AIASSNDPTRLTIGYKDQTNDVVSLNESTLT------GGSLGGLLSFRTETLDEAR 295

Query: 290 NELGQLSLGIANAFNEAQKAGFDMNGQVGSNIFIDINDPLIAQSRVGQYGSNTGTASLSV 349
            +LGQL+L  A+AFN   + G+D NG  G + F         ++ V     N G A L+ 
Sbjct: 296 GQLGQLALAFADAFNTQHQQGYDRNGVKGGDFF------SFGKAVVLNDSKNGGNAVLAP 349

Query: 350 SIEDVGALSGGAYELKYTAPGTYELTDTLTGDVTPLTLSGSTLTGGAGFN-INIG-AGAF 407
           S  +   +    Y +KY          T   D +  T +  T      F+ + +   G  
Sbjct: 350 SYTNTKDVQATNYSIKYDGANWQV---TRLSDNSKFTAAVDTSDNSLNFDGVKMAITGTP 406

Query: 408 ADGDRFLIRPTSGAAAQMSVVMTDPKAIAAAAPKI 442
           A  D FL++P +     M+V ++DP  IAAA+ K+
Sbjct: 407 ATNDSFLLKPVNDVIIDMAVAVSDPNKIAAASVKL 441



 Score = 84.0 bits (206), Expect = 2e-20
 Identities = 96/351 (27%), Positives = 156/351 (44%), Gaps = 30/351 (8%)

Query: 303 FNEAQKAGFDMNGQVGSNIFIDI---NDPLIAQSRVGQYGSNTGTASLSVSIEDVGALSG 359
           +N A K G ++     SN  + I   NDP   +  +G         SL+ S    G+L G
Sbjct: 225 YNVALKNGTNLVQAGTSNELVAIASSNDP--TRLTIGYKDQTNDVVSLNESTLTGGSL-G 281

Query: 360 GAYELKYTAPGTYELTDTLTGDVTPLTLSGSTLTGGA---GFNIN--IGAGAFADGDRFL 414
           G    +       E  D   G +  L L+ +         G++ N   G   F+ G   +
Sbjct: 282 GLLSFRT------ETLDEARGQLGQLALAFADAFNTQHQQGYDRNGVKGGDFFSFGKAVV 335

Query: 415 IRPT-SGAAAQMSVVMTDPKAIAAAAPKITADATN------SGNTKVT--VTSIDNRLAA 465
           +  + +G  A ++   T+ K + A    I  D  N      S N+K T  V + DN L  
Sbjct: 336 LNDSKNGGNAVLAPSYTNTKDVQATNYSIKYDGANWQVTRLSDNSKFTAAVDTSDNSL-- 393

Query: 466 NFPVTGSELTFTLNTGANTYDVTAADGTVLAAGVAYTPPSISAFGFTFEVESIGAATDSF 525
           NF      +T T  T  +++ +   +  ++   VA + P+  A       E+     D  
Sbjct: 394 NFDGVKMAITGTPATN-DSFLLKPVNDVIIDMAVAVSDPNKIAAASVKLDENGAPVLDGS 452

Query: 526 TFDLSYGEGDNSNALAMAQLADTKLMNGGKSTLIDVFEKTKQQIGSGTKAAEVRLGSAEA 585
              +  G  DN+NA A+  L + K++ GGK+++   +      IG+ T   ++   S + 
Sbjct: 453 GNPVFGGVSDNTNAKALLALQNEKIV-GGKASVSGAYASLVGAIGNQTSTLKINNTSQQN 511

Query: 586 IYQQAYGRVQEVSGVNLDEEAANLLRFQQSYQASARIMTTAQQIFDTLFAS 636
           + +Q     Q VSGVNLDEE  +L+R+QQ Y A+A+++ TAQ IFD L A+
Sbjct: 512 VVKQLTAEQQSVSGVNLDEEYGDLMRYQQYYIANAQVIKTAQSIFDALLAA 562