Pairwise Alignments

Query, 638 a.a., flagellar hook-associated protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 858 a.a., flagellar hook-associated protein FlgK from Magnetospirillum magneticum AMB-1

 Score = 93.6 bits (231), Expect = 3e-23
 Identities = 146/660 (22%), Positives = 266/660 (40%), Gaps = 82/660 (12%)

Query: 1   MSIDL-LNIARTGVLASQAQLGVTSNNIANVNTEGYNRQVATQATHLSQRSGNSFYGTGT 59
           MS+ L LN A +G+L +Q  L V S N+ NVNT+GY R+  T  + +      +  G G 
Sbjct: 1   MSLTLGLNSALSGLLTNQKGLDVISQNVVNVNTKGYVRKQMTPESRVV-----AGVGAGV 55

Query: 60  YVSSVKRVYNEYAARELRIGQTAKGAAEVSHTKMSELDQLFSQIG--KAIPQSLNDMFKN 117
              ++ R  +E   R++R   + +GA +V+ T    L+ +F  +G   +I   +  +  +
Sbjct: 56  QQGALTRNVDEGLMRDIRRQTSTQGALDVTQTYYPRLEDMFGTVGSSNSISHQIETLQAS 115

Query: 118 INSLADLPSDLGIRGGVLGSAQQMASAINEMQRQLEGQMKQTHEQIDAITTRVNEISTEL 177
             +LA   +    +   + +A  M    NEM   ++    +    +   T +VN+   ++
Sbjct: 116 FETLATQVNTPAFQSSTVQTANDMTDQFNEMTTHMQNLRLEADRALHDTTGQVNKQLEDI 175

Query: 178 ANINRELMK--TMGEDM-QLLDKQDALIMELSEYAQVNVIPLENGA--------KSIMLG 226
            ++N+++++   +G D+  L DK+D  +  LS+Y  +      +G+        K+++  
Sbjct: 176 FDLNQKIVRNNAIGGDIGDLQDKRDNALTTLSKYMDIQYFERGDGSVGVFTKSGKTLVDK 235

Query: 227 GAVML--VSAEVAMSMGTAQGDPYSDELRLTATTGSSTLVVDPSKLGGQLSALYEFRDKT 284
           G  +L  V+  +  S  T+ G  ++   +LT +T  S  V +     G++ AL + RD  
Sbjct: 236 GPAVLSHVATTITDSWMTSAGGNFN---KLTLSTTDSPDVGEDIN-DGEVRALLDLRDTI 291

Query: 285 LIPAENELGQLSLGIANAFNEAQKAG----FDMNGQVGSNIFIDINDPLIAQSRVGQYGS 340
           +   + ++ +++  + +A N+    G       +  VG+    D N+P +  S   Q   
Sbjct: 292 VPNLQAQIDEVASKLKDAVNQVHNRGTIFPTQSSKMVGTRQLADPNNPALNGSN-PQNIW 350

Query: 341 NTGTASLSVSIEDVGALSGGAYELKYTAPGTYELTDTLTGDVTPLTLSGSTLTGGA---- 396
            +G    ++++ D       A  ++ T   +   TD   G  T L +S +  T G     
Sbjct: 351 FSGNDDTTIALFDTNGNQLAATTVR-TIMSSTSYTDA-AGAATALDISDAATTPGVKMTD 408

Query: 397 ------------GFNINIGAGAFADGDRFLIRPTSGAAAQMSVVMTDPKAI----AAAAP 440
                        +  NI + A A      +   +G  + +++   D KA     AAA  
Sbjct: 409 VAAKIQSWMRQQSYQGNIMSAASASVSTGTLVLDTGVPS-VTLAFRDQKATAAGSAAADA 467

Query: 441 KITADATNSGNTKVTVTSIDNRLAANFPVTGSELTFTLNTGANTYDVTAADGTVLAAGVA 500
           +I  D          V    N    N   T S     +++     DV + D T+ AA   
Sbjct: 468 RINFDVDGDNKADKQVAGFSNFFGLNDFFTASVPNSIVDS-----DVVSKDFTLGAARSF 522

Query: 501 YTPPSISAFGFTFEVESIGAATDSFTFDLSYGEGDNSNALAMAQLADTKLMN-------- 552
                    G T  + +  +  D      +  + + S  L+ + L  T   N        
Sbjct: 523 TLSDPTGKIGNTINMSAGSSLYDIAKKINAQTQTNESATLSSSSLTTTSTTNITINDANG 582

Query: 553 --------GGKSTLIDVFEKTKQQIGSGTKAAEVRLGSAEAIYQQAYG-RVQEVSGVNLD 603
                    G  TL D+ +    Q GS  +AA V+ G        AY  RV +  GV LD
Sbjct: 583 RVTQLSLASGNMTLKDIADAINAQ-GSSAQAAAVQEG------PNAYRLRVWDSRGVPLD 635



 Score = 62.8 bits (151), Expect = 6e-14
 Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 7/113 (6%)

Query: 533 EGDNSNALAMAQLADTKL-------MNGGKSTLIDVFEKTKQQIGSGTKAAEVRLGSAEA 585
           EGDN+ ALA+     +K        +  G  T  +    +  Q+ +    A+ R      
Sbjct: 746 EGDNTTALALGAAMSSKTDMATAGSLYAGSYTFAEHAAASIAQVSTDAAHAKDRQDYQTT 805

Query: 586 IYQQAYGRVQEVSGVNLDEEAANLLRFQQSYQASARIMTTAQQIFDTLFASVR 638
           + Q    +    SGVNLDEE AN++ FQQ+Y ASA++++T Q++ DTL   V+
Sbjct: 806 LGQALNSQFASTSGVNLDEEVANMINFQQAYSASAKVISTLQEMLDTLVNIVK 858