Pairwise Alignments
Query, 638 a.a., flagellar hook-associated protein (RefSeq) from Shewanella amazonensis SB2B
Subject, 547 a.a., flagellar hook-filament junction protein 1 from Escherichia coli BL21
Score = 184 bits (466), Expect = 1e-50
Identities = 120/451 (26%), Positives = 201/451 (44%), Gaps = 15/451 (3%)
Query: 5 LLNIARTGVLASQAQLGVTSNNIANVNTEGYNRQVATQATHLSQRSGNSFYGTGTYVSSV 64
L+N A +G+ A+QA L SNNI++ N GY RQ A S + G G YVS V
Sbjct: 4 LINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYVSGV 63
Query: 65 KRVYNEYAARELRIGQTAKGAAEVSHTKMSELDQLFSQIGKAIPQSLNDMFKNINSLADL 124
+R Y+ + +LR QT + +MS++D + S ++ + D F ++ +L
Sbjct: 64 QREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQMQDFFTSLQTLVSN 123
Query: 125 PSDLGIRGGVLGSAQQMASAINEMQRQLEGQMKQTHEQIDAITTRVNEISTELANINREL 184
D R ++G ++ + + + L Q KQ + I A ++N + ++A++N ++
Sbjct: 124 AEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVNIAIGASVDQINNYAKQIASLNDQI 183
Query: 185 MKTMG-----EDMQLLDKQDALIMELSEYAQVNVIPLENGAKSIMLGGAVMLVSAEVAMS 239
+ G LLD++D L+ EL++ V V + G +I + LV A
Sbjct: 184 SRLTGVGAGASPNNLLDQRDQLVSELNQIVGVEVSVQDGGTYNITMANGYSLVQGSTARQ 243
Query: 240 MGTAQGDPYSDELRLTATTGSSTLVVDPSKL--GGQLSALYEFRDKTLIPAENELGQLSL 297
+ + G++ + P KL G L + FR + L N LGQL+L
Sbjct: 244 LAAVPSSADPSRTTVAYVDGTAGNIEIPEKLLNTGSLGGILTFRSQDLDQTRNTLGQLAL 303
Query: 298 GIANAFNEAQKAGFDMNGQVGSNIFIDINDPLIAQSRVGQYGSNTGTASLSVSIEDVGAL 357
A AFN KAGFD NG G + F I P + Q+ N G ++ ++ D A+
Sbjct: 304 AFAEAFNTQHKAGFDANGDAGEDFFA-IGKPAVLQNT-----KNKGDVAIGATVTDASAV 357
Query: 358 SGGAYELKYTAPGTYELTDTLTGDVTPLTLSGSTLTGGAGFNINIGAGAFADGDRFLIRP 417
Y++ + +++T + +T + G + G A D F ++P
Sbjct: 358 LATDYKISFD-NNQWQVTRLASNTTFTVTPDANGKVAFDGLELTF-TGTPAVNDSFTLKP 415
Query: 418 TSGAAAQMSVVMTDPKAIAAAAPKITADATN 448
S A M V++TD IA A+ + D+ N
Sbjct: 416 VSDAIVNMDVLITDEAKIAMASEEDAGDSDN 446
Score = 81.6 bits (200), Expect = 8e-20
Identities = 116/537 (21%), Positives = 204/537 (37%), Gaps = 58/537 (10%)
Query: 121 LADLPSDLGIRGGVLGSAQQMASAINEMQRQLEGQMKQTHEQIDAITTRVNEISTELANI 180
+A S LG GG +G+ ++ E + Q++ Q +T R ++S ++ N+
Sbjct: 41 MAQANSTLGA-GGWVGNGVYVSGVQREYDAFITNQLRAAQTQSSGLTARYEQMS-KIDNM 98
Query: 181 NRELMKTMGEDMQLLDKQDALIMELSEYAQVNVIPLENGAKSIMLGGAVMLVSA------ 234
++ MQ ++ +E + A+ ++G + LV+
Sbjct: 99 LSTSTSSLATQMQDFFTSLQTLVSNAE---------DPAARQALIGKSEGLVNQFKTTDQ 149
Query: 235 -------EVAMSMGTAQGDPYSDELRLTATTGSSTLVVDPSKLGGQLSALYEFRDKTLIP 287
+V +++G A D ++ + A+ + G + L + RD+ +
Sbjct: 150 YLRDQDKQVNIAIG-ASVDQINNYAKQIASLNDQISRLTGVGAGASPNNLLDQRDQLVSE 208
Query: 288 AENELG-QLSLGIANAFNEAQKAGFDM-NGQVGSNIFIDINDPLIAQSRVGQYGSNTGTA 345
+G ++S+ +N G+ + G + + +++ V G
Sbjct: 209 LNQIVGVEVSVQDGGTYNITMANGYSLVQGSTARQLAAVPSSADPSRTTVAYVDGTAGNI 268
Query: 346 SLSVSIEDVGALSGGAYELKYTAPGTYELTDTLTGDVTPLTLSGSTLTGGAGFNINIGAG 405
+ + + G+L G L + + + +TL G + AGF+ N AG
Sbjct: 269 EIPEKLLNTGSLGG---ILTFRSQDLDQTRNTL-GQLALAFAEAFNTQHKAGFDANGDAG 324
Query: 406 A--FADGDRFLIRPTSGAA-AQMSVVMTDPKAIAAAAPKITADATN------SGNTKVTV 456
FA G +++ T + +TD A+ A KI+ D + NT TV
Sbjct: 325 EDFFAIGKPAVLQNTKNKGDVAIGATVTDASAVLATDYKISFDNNQWQVTRLASNTTFTV 384
Query: 457 TSIDNRLAANFPVTGSELTFTLNTGANTYDVTAADGTVLAAGVAYTPPSISAFGFTFEVE 516
T N A G ELTFT N ++T +S +V
Sbjct: 385 TPDANGKVA---FDGLELTFTGTPAVND---------------SFTLKPVSDAIVNMDVL 426
Query: 517 SIGAATDSFTFDLSYGEGDNSNALAMAQLADTKLMNGGKSTLIDVFEKTKQQIGSGTKAA 576
A + + G+ DN N A+ L GG + D + IG+ T
Sbjct: 427 ITDEAKIAMASEEDAGDSDNRNGQALLDLQSNSKTVGGAKSFNDAYASLVSDIGNKTATL 486
Query: 577 EVRLGSAEAIYQQAYGRVQEVSGVNLDEEAANLLRFQQSYQASARIMTTAQQIFDTL 633
+ + + Q + Q +SGVNLDEE NL RFQQ Y A+A+++ TA IFD L
Sbjct: 487 KTSSTTQGNVVTQLSNQQQSISGVNLDEEYGNLQRFQQYYLANAQVLQTANAIFDAL 543