Pairwise Alignments

Query, 446 a.a., flagellum-specific ATP synthase (RefSeq) from Shewanella amazonensis SB2B

Subject, 457 a.a., Flagellum-specific ATP synthase from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  505 bits (1300), Expect = e-147
 Identities = 273/427 (63%), Positives = 320/427 (74%), Gaps = 13/427 (3%)

Query: 9   LNNLRQLRQSLPVNRPVAEGQLVRVVGLTLEASGCRAPVGSLCAIDTMGG----ELIAEV 64
           L+N       LP  R    G+L R  GL LEA+G + P+G+ C I+   G    E+ +EV
Sbjct: 12  LDNFEAKMAQLPAVRRY--GRLTRATGLVLEATGLQLPLGATCVIERQNGSETHEVESEV 69

Query: 65  VGFDEDLLYLMPIEELKGVLPGARVRPL-----GEQTG--IHVGMSLLGRVLDGGGEPLD 117
           VGF+   L+LMP+EE++GVLPGARV        G Q+G  + +G +LLGRVLDG G+PLD
Sbjct: 70  VGFNGQRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGKQLPLGPALLGRVLDGSGKPLD 129

Query: 118 GLGPLGTTDIAPRHGPAINPLARRPIHEPLDVGIRAINAMLTVGKGQRMGLFAGSGVGKS 177
           GL    TT+      P  NPL R PI   LD G+R INA+LTVG+GQRMGLFAGSGVGKS
Sbjct: 130 GLPSPDTTETGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKS 189

Query: 178 VLLGMMTRGTTADVIVVGLVGERGREVKEFIEEILGPEGRARSVVVAAPADTSPLMRLRA 237
           VLLGMM R T ADVIVVGL+GERGREVK+FIE ILG EGRARSVV+AAPAD SPL+R++ 
Sbjct: 190 VLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQG 249

Query: 238 CETSTRIAEYFRDLGFNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLV 297
              +TRIAE FRD G +VLL+MDSLTRYA AQREIALA+GEPPATKGYPPSVFAKLP LV
Sbjct: 250 AAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALV 309

Query: 298 ERAGNGGPGQGSITAFYTVLTEGDDLQDPIADAARAILDGHIVLSRTLADSGHYPAIDIE 357
           ERAGNG  G GSITAFYTVLTEGDD QDPIAD+ARAILDGHIVLSR LA++GHYPAIDIE
Sbjct: 310 ERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIE 369

Query: 358 ASISRVAPMVISPAHLEAMRRVKQTYSLYQQNRDLISIGAYAAGSDPRIDNAIRLQPAMN 417
           ASISR    +IS  H   +R  KQ  S +Q+NRDL+S+GAYA GSDP +D AI L P + 
Sbjct: 370 ASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLE 429

Query: 418 AFLRQGM 424
            +L+QG+
Sbjct: 430 GYLQQGI 436