Pairwise Alignments

Query, 167 a.a., transcriptional activator rfaH, putative (RefSeq) from Shewanella amazonensis SB2B

Subject, 162 a.a., transcriptional activator RfaH (NCBI) from Escherichia coli BW25113

 Score = 90.1 bits (222), Expect = 2e-23
 Identities = 57/166 (34%), Positives = 84/166 (50%), Gaps = 5/166 (3%)

Query: 1   MKAWYLIYCKPRNEMRAQQNLSMQNLETYLPKHRKQVKASGGAVSVSESVLFPNYLFVQF 60
           M++WYL+YCK     RAQ++L  Q +    P    +    G   +VSE  LFPNYLFV+F
Sbjct: 1   MQSWYLLYCKRGQLQRAQEHLERQAVNCLAPMITLEKIVRGKRTAVSEP-LFPNYLFVEF 59

Query: 61  DPEVTSVRSIHATRGVSRIVGCSEQMTPIDDALIRALK-RKELQVEKLACEKPLAAGERV 119
           DPEV    +I+ATRGVS  V        +  A+I  L   K   +   A   P   G++V
Sbjct: 60  DPEVIHTTTINATRGVSHFVRFGASPAIVPSAVIHQLSVYKPKDIVDPATPYP---GDKV 116

Query: 120 KFCAGPFSDLEAIFLESDGNKRCQVLFEFMGQQKQLDVESSSIVRI 165
               G F   +AIF E DG  R  +L   + ++ +  V+++   ++
Sbjct: 117 IITEGAFEGFQAIFTEPDGEARSMLLLNLINKEIKHSVKNTEFRKL 162