Pairwise Alignments

Query, 357 a.a., DegT/DnrJ/EryC1/StrS family protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 437 a.a., lipopolysaccharide biosynthesis protein RfbH from Pseudomonas simiae WCS417

 Score =  103 bits (256), Expect = 1e-26
 Identities = 91/292 (31%), Positives = 129/292 (44%), Gaps = 43/292 (14%)

Query: 16  KIDARIQAVLEHGHYIMGPEVAELEDKLAEYVGVKHAITCANGTDA-----LTLVMMALG 70
           ++   ++A L+ G    G   AE E KLAE++GVK  ++  +G+ A      TL    LG
Sbjct: 45  ELQLMVEASLD-GWLTTGRFNAEFEKKLAEFIGVKFLLSVNSGSSANLVAFSTLTSPKLG 103

Query: 71  ---IKEGDAVFCPTFTFFATAEVIAYEGATPVFVDSDADTFNICPLDLEKQIQKVIAEGK 127
              IK+GD V      F  T   I   GA PVFVD D  T NI    +E  I        
Sbjct: 104 ERAIKKGDEVIGVAAGFPTTVNPIVQFGAIPVFVDVDMATHNINADLIEAAITP------ 157

Query: 128 LKPAAIIAVDLFGLPANYPELEKIAKQYGLKLVEDAAQGFGGEIEDKRAGSFGDIATTSF 187
            K  AI+     G P N  +++ + ++Y L LVED     G   + K  G+FGDIAT SF
Sbjct: 158 -KTKAIMLAHTLGNPFNLGKVKALCEKYNLWLVEDCCDALGATYDGKLVGTFGDIATLSF 216

Query: 188 FPAKPLGCYGDGGAIFTNDDHYAELIRSLRVHGK-------------------------G 222
           +PA  +   G+GGA+FTN+     +  S R  G+                         G
Sbjct: 217 YPAHHI-TMGEGGAVFTNNPMLKVIAESFRDWGRDCYCAPGCDNTCGDRFGQQYGSLPQG 275

Query: 223 KD-KYDNIRVGMNSRLDTLQAAVLLEKLAAFPQELISRNKAAKRYSRELSSI 273
            D KY    +G N ++  +QAA  L +L      + +R +        LSS+
Sbjct: 276 YDHKYVYAHLGYNLKITDMQAACGLAQLERAQDFIDTRKRNFALLKERLSSL 327