Pairwise Alignments

Query, 1431 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 637 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  395 bits (1016), Expect = e-114
 Identities = 225/550 (40%), Positives = 319/550 (58%), Gaps = 7/550 (1%)

Query: 869  KQAEEQLRLFERAIENISEGMFILDHEFRFVEVNEACCDICLMDKDSFIGTQ---LQFSC 925
            K+  E+LR      +   EG+ + D +   V VN A  +I    ++  +G Q    +   
Sbjct: 77   KENRERLRQAAAVFDCTREGVLVTDTKGLIVHVNRAFMEITGYSREDVMGRQPSLFKSGR 136

Query: 926  YPDAYSEQVRIILRQQGRWSAEVESRRGDNSTFLMELTVDAIYDEQGTLSHFVGVFSDIS 985
            +   + +Q+   L + G WS E+ +RR     +    T+  I+D+QG +SH+V VFSDIS
Sbjct: 137  HSSNFYQQMFQSLERTGEWSGEIWNRRKSGEIYPQWQTIRVIHDDQGQVSHYVAVFSDIS 196

Query: 986  RRKQQEEELRKLTNNDLLTGLPNRSNLQVSLNN-LVKKDTHH---TLMVLDLDNFKKIND 1041
              K  E EL  L ++D LT LPNR          L    TH     L++LDLD+FK IND
Sbjct: 197  AIKDSEHELAHLAHHDPLTDLPNRLLFTDRAEQALASAQTHKRGCALLLLDLDHFKIIND 256

Query: 1042 SLGHQVGDELLQLVSRRMSAALPGHTSLYRLGGDEFAVLLDKDPDIGSAAAIAKGLVDAF 1101
            SLGH VGD+LL+LV  R+ A      +L RLGGDEFAVL +  P +  AA +A+ ++DA 
Sbjct: 257  SLGHNVGDQLLKLVGERLKALFGPGVTLARLGGDEFAVLAESCPQVAQAAGLAQRMLDAM 316

Query: 1102 VAPFELAGEKLVVGVSIGIVLYPEDEQNEQALLRKADIAMYHAKSAGGNRYQFYSESLNR 1161
              PF   G +L +  SIGI L+P D  + + LLR AD A++ AKSAG   Y  Y+E L  
Sbjct: 317  KQPFIFDGHQLFISASIGISLFPSDALSAEQLLRNADSALFKAKSAGREGYALYTEELTA 376

Query: 1162 NALRQLEVENLIRDGLRDDLFEVYYQPKVDLRNSRMAGMEALVRLNHPTQGLIPPSEFIP 1221
            +A  ++E+ + +R  L      VYYQP  DL +SR+ G+EALVR  HP +GL+PP EFIP
Sbjct: 377  HAQNRVEIASELRRALEQQELCVYYQPVHDLNDSRLIGVEALVRWQHPERGLVPPGEFIP 436

Query: 1222 LAEETGLIVEIGDLVMRKACFAAQRWREQGLFDGRVAVNLSSRQFALTDLQQRIESILRL 1281
            +AE TGLI +I   VM +AC     W  QG     +A+N+SSR FA  +L +++  +L  
Sbjct: 437  IAERTGLIADIDAWVMNQACRQMCDWLAQGTPLSFIAINVSSRLFARRELYEQVAQVLHD 496

Query: 1282 TKLPAANLELEITEGTVIKQPEKAIKVMQQLAKMGVSLALDDFGTGYSSLSYLKRFPIHT 1341
            T L  A LELE+TE  V++ PE A++ + +L ++G+ LA+DDFGTGYSSL  LKR P+  
Sbjct: 497  TGLDPAFLELEVTESAVMEDPEVALEQLHRLRELGLRLAIDDFGTGYSSLLRLKRLPVQK 556

Query: 1342 LKIDKAFVDDIDKSDRDLKMVDSIITIAHNMGLTVVGEGVEVPSQLNILRALKCEEVQGY 1401
            LKID+ FV  +   + D  +V  +I +A +MG+ V  EG+E   Q   L   +C+  QGY
Sbjct: 557  LKIDQGFVAGLPWDEDDAAIVRVVIALAKSMGMQVHAEGIEQREQARFLLDQQCDLGQGY 616

Query: 1402 IYSKAVPEAE 1411
             + + VP  E
Sbjct: 617  WFGRPVPAGE 626