Pairwise Alignments

Query, 261 a.a., tRNA pseudouridine synthase A (RefSeq) from Shewanella amazonensis SB2B

Subject, 256 a.a., tRNA pseudouridine(38-40) synthase TruA from Magnetospirillum magneticum AMB-1

 Score =  174 bits (441), Expect = 2e-48
 Identities = 103/248 (41%), Positives = 140/248 (56%), Gaps = 1/248 (0%)

Query: 2   RIALGIEYDGSKFYGWQRQAEVNSVQAELERALSIVANEPIEVQCAGRTDAGVHATGQVV 61
           R  L +EYDG+ F GWQRQ +  SVQ  LE+A+  +   P  +  AGRTDAGVHATGQV 
Sbjct: 3   RYRLLVEYDGTPFNGWQRQDKGLSVQGILEKAVEKLCGVPCTLHAAGRTDAGVHATGQVA 62

Query: 62  HFDTNAVRKEGAWTLGVNVHL-PDDIAVRWAMPVNDDFHARFSATARRYRYVIFNHNFRP 120
           H D             +N H+ P  +AV  A  V++DFHARFSA  R Y Y I N     
Sbjct: 63  HVDLPRDYPADTVRDALNYHMKPKPVAVVAAELVDEDFHARFSAVGRAYLYRIVNRRAPL 122

Query: 121 GILRKGVSHYHGDIDVERMHDAAQALIGERDFTSFRAIGCQSNTPFRNVHKVSVSRHGMY 180
            + +         +D E M + A+ L+G  DF++FRA  CQ+ +P + +  + V+R G  
Sbjct: 123 ALDQHRAWWVPVALDAEAMAEGARRLLGHHDFSTFRASECQAKSPMKTLDVLDVTRVGEE 182

Query: 181 IVVDIQANAFLHHMVRNIVGSLLEIGLGNQPLDWMATLLEAKDRSQAAATAKPHGLYLVD 240
           I +  +A +FLHH VRN+VG+L  +G G    D MA +LEA+DR++   TA   GL L  
Sbjct: 183 IRIVAEARSFLHHQVRNMVGTLKLVGEGKWSPDDMAKVLEARDRTKGGPTAPAAGLVLTG 242

Query: 241 VTYPESFG 248
           V+Y  S G
Sbjct: 243 VSYSASGG 250