Pairwise Alignments

Query, 261 a.a., tRNA pseudouridine synthase A (RefSeq) from Shewanella amazonensis SB2B

Subject, 247 a.a., tRNA pseudouridine(38-40) synthase TruA from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  176 bits (446), Expect = 4e-49
 Identities = 102/244 (41%), Positives = 137/244 (56%), Gaps = 2/244 (0%)

Query: 2   RIALGIEYDGSKFYGWQRQAEVNSVQAELERALSIVANEPIEVQCAGRTDAGVHATGQVV 61
           R  L IEYDG+ + G+Q Q    +VQ  LE A+   + E I +  AGRTD GVHAT QV+
Sbjct: 3   RYKLTIEYDGTAYNGFQAQDGQPTVQGALEAAIHAFSGERIRIAAAGRTDTGVHATAQVI 62

Query: 62  HFDTNAVRKEGAWTLGVNVHLP-DDIAVRWAMPVND-DFHARFSATARRYRYVIFNHNFR 119
           H D +           +N HL   D+ V  +    D D+HARFSAT R Y Y I N   +
Sbjct: 63  HADLDRDWPVDTVLNAMNAHLVRQDVCVLASEYAPDPDWHARFSATGRGYLYRILNRRPQ 122

Query: 120 PGILRKGVSHYHGDIDVERMHDAAQALIGERDFTSFRAIGCQSNTPFRNVHKVSVSRHGM 179
           P + R  V H    +D E MH AAQ L+G  DFT+FR +GCQS +P +++    V+R G 
Sbjct: 123 PVLERDRVWHVKKTLDAEAMHHAAQVLVGHHDFTTFRDVGCQSKSPVKSLDVARVTRFGE 182

Query: 180 YIVVDIQANAFLHHMVRNIVGSLLEIGLGNQPLDWMATLLEAKDRSQAAATAKPHGLYLV 239
            + +  QA +FLH  VR++ G+L+E+GLG      +   LEAKDR++    A   GLYL 
Sbjct: 183 EVHLVFQARSFLHRQVRSMAGTLVEVGLGRWSAHDVKAALEAKDRARCGPVAPSAGLYLS 242

Query: 240 DVTY 243
            V Y
Sbjct: 243 GVRY 246