Pairwise Alignments

Query, 261 a.a., tRNA pseudouridine synthase A (RefSeq) from Shewanella amazonensis SB2B

Subject, 270 a.a., tRNA pseudouridine(38-40) synthase from Escherichia coli BL21

 Score =  382 bits (982), Expect = e-111
 Identities = 182/260 (70%), Positives = 214/260 (82%)

Query: 2   RIALGIEYDGSKFYGWQRQAEVNSVQAELERALSIVANEPIEVQCAGRTDAGVHATGQVV 61
           +IALGIEYDGSK+YGWQRQ EV SVQ +LE+ALS VANEPI V CAGRTDAGVH TGQVV
Sbjct: 11  KIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALSQVANEPITVFCAGRTDAGVHGTGQVV 70

Query: 62  HFDTNAVRKEGAWTLGVNVHLPDDIAVRWAMPVNDDFHARFSATARRYRYVIFNHNFRPG 121
           HF+T A+RK+ AWTLGVN +LP DIAVRW   V DDFHARFSATARRYRY+I+NH  RP 
Sbjct: 71  HFETTALRKDAAWTLGVNANLPGDIAVRWVKAVPDDFHARFSATARRYRYIIYNHRLRPA 130

Query: 122 ILRKGVSHYHGDIDVERMHDAAQALIGERDFTSFRAIGCQSNTPFRNVHKVSVSRHGMYI 181
           +L KGV+H++  +D ERMH AAQ L+GE DFTSFRA+ CQS TP+RNV  ++V+RHG Y+
Sbjct: 131 VLSKGVTHFYEPLDAERMHRAAQCLLGENDFTSFRAVQCQSRTPWRNVMHINVTRHGPYV 190

Query: 182 VVDIQANAFLHHMVRNIVGSLLEIGLGNQPLDWMATLLEAKDRSQAAATAKPHGLYLVDV 241
           VVDI+ANAF+HHMVRNIVGSL+E+G  NQP  W+A LL AKDR+ AAATAK  GLYLV V
Sbjct: 191 VVDIKANAFVHHMVRNIVGSLMEVGAHNQPESWIAELLAAKDRTLAAATAKAEGLYLVAV 250

Query: 242 TYPESFGLPKLSLGPLFMPD 261
            YP+ + LPK  +GPLF+ D
Sbjct: 251 DYPDRYDLPKPPMGPLFLAD 270