Pairwise Alignments

Query, 261 a.a., tRNA pseudouridine synthase A (RefSeq) from Shewanella amazonensis SB2B

Subject, 266 a.a., tRNA pseudouridine synthase I from Agrobacterium fabrum C58

 Score =  186 bits (472), Expect = 4e-52
 Identities = 100/247 (40%), Positives = 140/247 (56%), Gaps = 3/247 (1%)

Query: 2   RIALGIEYDGSKFYGWQRQAEVNSVQAELERALSIVANEPIEVQCAGRTDAGVHATGQVV 61
           R  + +EYDG+ +YGWQRQ    SVQ  LE A+  +  E + ++ AGRTD+GVHA GQV 
Sbjct: 3   RFRMTVEYDGTPYYGWQRQENGPSVQGALEAAVRSLTGESVSIRGAGRTDSGVHAVGQVA 62

Query: 62  HFDTNAVRKEGAWTLGVNVHLP---DDIAVRWAMPVNDDFHARFSATARRYRYVIFNHNF 118
           H D +   +       +N HL    + +AV  A  V +DF ARFSA  R Y Y I     
Sbjct: 63  HIDLSRDWEPYKLRNALNAHLAMAGEAVAVLDAAAVTEDFDARFSALRRHYLYRIICRKS 122

Query: 119 RPGILRKGVSHYHGDIDVERMHDAAQALIGERDFTSFRAIGCQSNTPFRNVHKVSVSRHG 178
           R  +  K       D+D ERMH+AAQ L+G  DFT+FR++ CQ+N+P R + ++ V+R+G
Sbjct: 123 RLALEHKRAWWVSKDLDHERMHEAAQMLVGRHDFTTFRSVHCQANSPVRTLDRLDVTRNG 182

Query: 179 MYIVVDIQANAFLHHMVRNIVGSLLEIGLGNQPLDWMATLLEAKDRSQAAATAKPHGLYL 238
             I +   A +FLH+ +R+  G+L   G G    D +   LEA+DR      A P GLY 
Sbjct: 183 DLIEIRATAQSFLHNQIRSFAGTLKLAGEGGMTPDDVRAALEARDRKACGPVAPPDGLYF 242

Query: 239 VDVTYPE 245
           + V YP+
Sbjct: 243 MQVDYPD 249