Pairwise Alignments

Query, 505 a.a., MATE efflux family protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 453 a.a., membrane protein, putative from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  209 bits (531), Expect = 2e-58
 Identities = 136/442 (30%), Positives = 225/442 (50%), Gaps = 6/442 (1%)

Query: 4   AKFVEGPILRHILVMSSTAAVGISALFLVDLLDIFFLSLLGEAELAAAVGYAGTISFFTT 63
           A+F +G + RHI+V +S +A+ + A+FLVD+L + ++S+L +  L AAVG A  + FF  
Sbjct: 6   ARFTQGSVARHIVVTASASALSLFAVFLVDILTLVYVSMLHDPVLLAAVGIAKVLMFFNG 65

Query: 64  SIGIGLSIALGAQVSRAIGAREIDNAKRLLMSSLLVTLAVSSLVSLLVSLNIPALLTLVG 123
           ++  GL IA  + +S  IG R   +  RL  S +L+ + VS L +      I  +   +G
Sbjct: 66  ALATGLIIAGASVLSARIGHRAARSIPRLTGSLMLMVITVSGLAAAAQLTFIVPITRWLG 125

Query: 124 ATGQTAELAADYLYILVPSLPFICLAMALGAALRAVGDAKLSMVSTLVGGGVNLVLDPIL 183
           A   T E A  ++++ +P      +       LR +GD + +M   L       V DP  
Sbjct: 126 AEAATYEAARSFIWLTLPFTALQAVMQMSAQMLRTIGDNRRAMGVVLSAAATLAVADPFF 185

Query: 184 IFVLAMGIEGAAVASVLARLSVMLVAGRGVF-VKHGLGSKPTRDAFVGDL--KPIFAIAG 240
           IF L +G++GA +A  +   S  + A  G++ V+  +G   TR+  +  L  +  F +A 
Sbjct: 186 IFALGLGLDGAGIAFAV---SAAVSASIGLYWVRSRIGIVFTRNLKLLRLHARHTFRLAL 242

Query: 241 PAMITNVATPIGNGFMTRAIAEFGDAYVAGWAVLGRLTPVAFGMIFALSGAIGPIVGQNF 300
           PAM  N+ATP+G  ++  +++ FG + +A   VL R+   ++   FAL GA+ P++GQN 
Sbjct: 243 PAMAANLATPVGLAYLVASLSAFGTSALAAMTVLDRVIQFSYCAFFALPGALAPVLGQNI 302

Query: 301 GARRYDRLRDCLTQSLLFCTVYVVGMALVLFLAQDLIVSAFDLKGDSAEFIGFFLTYIAV 360
           GA R DR+R  +  +      Y + + LVL L   +I   + L  ++      F  +   
Sbjct: 303 GASRDDRVRSAVVFTRRLVVCYGLAVWLVLLLCGGMIADLYQLGDEARAVFMAFCLWGGG 362

Query: 361 FFVFSGALFVANASFNNLGKAKYSTVFNVGKATLGTLPFIWLGAQYGGVYGVLIGQVLGS 420
            +V  G  FVA A F  + ++ +  VF   +AT GT+PF++ G  + G  G L G   G+
Sbjct: 363 LWVLIGLDFVAIAVFLTMNRSWWVAVFAWLRATAGTVPFVFAGTHWFGSSGALPGMFTGN 422

Query: 421 VLFGVAGVYTAYRLVASFESDR 442
            L  +  + TA      F + R
Sbjct: 423 ALIALISITTASLTAKRFFTSR 444