Pairwise Alignments

Query, 588 a.a., DNA damage response helicase (yejH or radD) (from data) from Shewanella amazonensis SB2B

Subject, 485 a.a., DEAD/DEAH box helicase family protein from Variovorax sp. OAS795

 Score = 78.6 bits (192), Expect = 6e-19
 Identities = 96/393 (24%), Positives = 164/393 (41%), Gaps = 63/393 (16%)

Query: 35  ESALLVLPTGAGKS---LVIAELARLAKGRVLVLTHVKELVAQNAQKVDALA-GNASIFS 90
           ++ +L+ PTGAGK+   L IA+ A     R   L     L+ Q  ++      G+  +  
Sbjct: 6   KNQMLMAPTGAGKTYLGLRIAQKALKQGKRATFLCDRITLIDQTCKRAFEYGLGDHGVIQ 65

Query: 91  AGLGEKDSGGKTVVAGIQSAAVNVAAFDEPFSLVIIDECHRVSLDENSQYRQVFSQLREK 150
                +D   +  +A +Q+  +    + +   ++I+DE H          R  +     K
Sbjct: 66  GDHFRQDWSKRFQIASVQT--IESRGWPDT-DVLIVDEAHT--------QRDTWVDYAMK 114

Query: 151 NPDLLLLGLTATPYRLGEGAIYKRHVRGHVGNPDKGVFDVCIFELPIRSLIKQGYLTEPL 210
           +    ++GL+ATP+  G G                 VF   +    + +L + G L    
Sbjct: 115 SA-ARVIGLSATPFSKGLGK----------------VFTNLVSPTTMHALTESGVLVPMR 157

Query: 211 LLDGLAAQYNFAALKASEDADYQEAEVQAILDTSTRATTTIMGQLKALAQQRLGVIIFAA 270
           +L     + + A  K +   ++Q AE     +        ++ +    A+ R   I+F A
Sbjct: 158 VLS--CRRPDMAGAKTNSFGEWQPAEAS---ERGMEIIGDVVAEWLRHAENRK-TIVFGA 211

Query: 271 TVRHAKEIMALLDES---AALITADTPGPERDNIITAFKAQE--LKFLVNVAVLTTGFDA 325
           T+ H +E+    +E+   +A  T DT   ERD +I  F+  +  ++ L++V  L  GFD 
Sbjct: 212 TIAHCEELCRQFNEAGIFSATFTKDTDKRERDQLIAEFEKPDSSIRVLISVEALAKGFDV 271

Query: 326 PHVDLIAILRP-TASVSLFQQMVGRGLRLFP--GKAECLILDYAAN------------GF 370
             V  +   RP   S+S   QM GRGLR  P  GK +CL+LD++ N              
Sbjct: 272 QDVGCVVDCRPLRKSLSTAIQMWGRGLRSSPATGKEDCLLLDHSGNITRFAEDYTRIFFN 331

Query: 371 SLYHPDVGKP-----RPDSKSVPVQVPCPACGF 398
            L   D+G+      RPD +    +  CP C +
Sbjct: 332 GLDSLDMGEALDKQIRPDGQEERERTGCPKCQY 364