Pairwise Alignments

Query, 296 a.a., Cytidine deaminase (EC 3.5.4.5) (from data) from Shewanella amazonensis SB2B

Subject, 294 a.a., cytidine deaminase from Serratia liquefaciens MT49

 Score =  234 bits (596), Expect = 2e-66
 Identities = 128/284 (45%), Positives = 163/284 (57%), Gaps = 1/284 (0%)

Query: 1   MQDRFVRRINELPKALADELLPML-GEQFCGHLDAQQVKQLCAVSAMDSHELGLALLPIA 59
           M  RF     ELP  L   LLP      F   L A+QV  +     +D   L  ALLP+A
Sbjct: 1   MHPRFQTAFAELPATLQSALLPYFDAPDFPAMLKAEQVDAIKQRCGLDDDALAFALLPLA 60

Query: 60  AALAKPPVSNFYVGAIAVGSGGDFYMGANLELQGEALFHSVHAEQSAISHAWLSGETQIS 119
           AA +  P+S FYVGAIA G  G+ Y GAN+E  G  +  ++HAEQ A++HAWL GE+ ++
Sbjct: 61  AACSLAPISQFYVGAIARGQSGNLYFGANMEFSGAPMQQTIHAEQCAVTHAWLRGESALA 120

Query: 120 DIIVNASPCGHCRQFMNELVQGQAIRIHLPGQDTAPLSHYLPYAFGPADLNVTAPLLSKQ 179
            I VN +PCGHCRQFMNEL  G  ++I LPG++ A L  YLP AFGP DLN+   L+ + 
Sbjct: 121 SITVNYTPCGHCRQFMNELNSGTTLKIRLPGREPATLGDYLPDAFGPKDLNIATLLMDRV 180

Query: 180 QTELVLESDDPLLIEALDHAGLSYAPYSQCHAAVVLETEDGASFCGRYAENAAFNPSMLP 239
                L   D L + AL  A  S+APYS  H+ V LE EDG  + GRYAENAAFNPS+ P
Sbjct: 181 DHGFQLTLTDELEMAALAAANQSHAPYSNAHSGVALEAEDGTIYSGRYAENAAFNPSLPP 240

Query: 240 MQMALSALVRHNRSFSDIKRAVLLESSQGKISLVGATMDALHAV 283
           +Q AL  +         + RAVL E     ++   AT   L A+
Sbjct: 241 LQAALILMNVSGGDCQKVVRAVLAEPDSAILTQWDATRATLAAL 284