Pairwise Alignments

Query, 289 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 168 a.a., hypothetical protein from Pseudomonas sp. DMC3

 Score = 48.5 bits (114), Expect = 1e-10
 Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 18/143 (12%)

Query: 9   SLLLLSCAAFAKSTVGQSVEIHQPASGLSFI-ARVDTGASISSIHAVDIEVLGGEAESMK 67
           +L+ L   A   +  G+   I  P  G   + A++DTGA  +S+ A DIE    + E   
Sbjct: 9   ALVALPVMAAEPTLYGRYEYIALPEIGGEVLKAKMDTGALTASLSAKDIETFTRDGEDW- 67

Query: 68  DNIGKRVKFTTEGLGGVTKAIEAKIVKVTTVSN----------SQGTESRYTVELELQYE 117
                 V+F         K  E K+ +++ + +          S     R  V+LEL   
Sbjct: 68  ------VRFRLATKDASNKVFEHKVARISKIKSRSDEDDEERDSSDVAKRPVVDLELCLG 121

Query: 118 KDVRNIRVNLRDRGHMDYKLLLG 140
              R + VNL DR H +Y LL+G
Sbjct: 122 NVKRTVEVNLTDRSHFNYPLLIG 144



 Score = 38.5 bits (88), Expect = 1e-07
 Identities = 42/135 (31%), Positives = 59/135 (43%), Gaps = 4/135 (2%)

Query: 150 VDVAEKNVIGERAPIHLLE-GDITFDTRIDTGAVENSLHATDIQIENEHPSD-MEANVGK 207
           V  AE  + G    I L E G      ++DTGA+  SL A DI+       D +   +  
Sbjct: 15  VMAAEPTLYGRYEYIALPEIGGEVLKAKMDTGALTASLSAKDIETFTRDGEDWVRFRLAT 74

Query: 208 PISFTTVNEKGEKR--RIHSRITETSLIRNAQGSEVRYMVELTLGEPGKEFKVKVNLRDR 265
             +   V E    R  +I SR  E    R++     R +V+L L     +  V+VNL DR
Sbjct: 75  KDASNKVFEHKVARISKIKSRSDEDDEERDSSDVAKRPVVDLELCLGNVKRTVEVNLTDR 134

Query: 266 SEMTHKLLIGRNWLQ 280
           S   + LLIG   L+
Sbjct: 135 SHFNYPLLIGAKALR 149