Pairwise Alignments

Query, 665 a.a., ATP-dependent helicase DinG (RefSeq) from Shewanella amazonensis SB2B

Subject, 648 a.a., putative ATP-dependent DNA helicase YoaA from Methylophilus sp. DMC18

 Score =  441 bits (1133), Expect = e-128
 Identities = 266/665 (40%), Positives = 375/665 (56%), Gaps = 29/665 (4%)

Query: 9   NLITRTQAVFDEGGLLSRFIRGYRRREVQQQMAEEVASCLSHTHKLVLEAGTGVGKTFAY 68
           +L  +  + F E G L++ +  +R R  QQ+MA  +A  +    +LV EAGTG GKT+AY
Sbjct: 2   SLAQQVSSAFSENGSLAQAMPDFRSRPQQQEMALAIAEAIEQQQQLVAEAGTGTGKTYAY 61

Query: 69  LVPALLSGKQVIVSTGSKNLQEQLFYKDLPALLEMLKLHLPVSILKGRSNYLCQ-RLMAA 127
           LVPALLSG +VI+STG+K LQ+QLF +DLPA+ E LK+ + V++LKGR+NYLC   L  A
Sbjct: 62  LVPALLSGGKVIISTGTKTLQDQLFQRDLPAVREALKVPVSVAMLKGRANYLCHYHLQRA 121

Query: 128 QMEAAFSHDEKLLDDLLKLNQFAQTTEDGDLGNLTGVAEDARAISLVASTQDSCTGQRCA 187
             E  F   E     +  L  FA+ ++ GD   L  V E A     V ST+D+C GQ C 
Sbjct: 122 SQEGRFQSREDA-QYIPILQSFAEHSQTGDKAELVEVPEQATVWQQVTSTRDNCVGQDCQ 180

Query: 188 FYEDCFTRKARARAMNARLIVVNHHLFFADRVLKDTGFAELLPDVDAVIFDEAHLLPDIA 247
           FY+ CF  +AR +A+ A ++VVNHHLFFAD +L+D G AELLP  + V+FDEAH LP++A
Sbjct: 181 FYKQCFVMEARKQALAADVVVVNHHLFFADVMLRDEGVAELLPSANTVVFDEAHQLPEVA 240

Query: 248 MQYFGAQLSTGSLRRLLDGIERLTEGELGDTQGL-KLLPQRARIKLDAWQNCLLDAGSSD 306
             +FG  +ST  L  L    +        D   L + +P   +   D       +     
Sbjct: 241 GLFFGEDISTSQLMDLARDSQMAYLSLAKDCVALSEAVPPLEKACRDFRLVFQFEGSRMP 300

Query: 307 FRQLLKDKTAALAAGELIAELSALEALLLANVGRSEPLDDFAVKLPELKQKLERFIACDD 366
            ++    K    A   ++  L+AL A+L    GR   L+    +   L   L+ ++  + 
Sbjct: 301 AQKAQTMKNFDEAFQRMLETLAALTAVLETQAGRDPLLEKCWQRGEALLALLQAWLKGNH 360

Query: 367 PGSAYSIDIGERHLMLRISPIDIAKACS-ELFSEDTAWVFTSATLQVERSLQFFTRELGL 425
                 +++  + + L  +P+ +A     +L ++  AW+FTSATL V+     +  ++GL
Sbjct: 361 ANLVRWVEVFSQSVQLHATPLSVADGFGKQLNAQPRAWIFTSATLAVKSDFSHYQSQMGL 420

Query: 426 TSAKPVSAKRSQSGAGAKSAVCKEVLLDSPFDYPRQSLLCVPRRLGSVANQDAMVCQLTE 485
            +A+    +                   SPFDY +Q+LL VP  +    N  A    +  
Sbjct: 421 LAAQTRHWQ-------------------SPFDYGQQALLYVPTGMPE-PNSSAYAAAVAA 460

Query: 486 VCLKLIRAAKGRTFILFTSHRMMEAVARSLVGR-----CHYPLLVQGQGGKQQLLSKFRQ 540
           V L +++A++GR F+L TS + M  V   L         +YPLL+QG+  + +LL +FR 
Sbjct: 461 VSLPVLQASRGRAFVLCTSLKAMREVHALLKNAFEELGLNYPLLMQGESNRTELLDRFRS 520

Query: 541 LGEAVLLGTGSFWEGVDVRGKLLSCVIIDKLPFASPDDSLYKARASRVEARGGDPFLEIS 600
            G AVL+G+ SFWEGVDVRG+ LSCVIIDKLPFA PDD +  AR  ++ A G + F+E  
Sbjct: 521 HGNAVLVGSQSFWEGVDVRGEALSCVIIDKLPFAPPDDPVLAARIDKMNAEGKNAFMEYQ 580

Query: 601 LPQAVIALKQGAGRLIRDETDRGVLVICDNRLVNRPYGQAFLQSLPPMARTRDLDEACAF 660
           LP AVI LKQGAGRLIRDE D GVL+ICD RLV++PYG+   QSLPP  RTR   E   F
Sbjct: 581 LPYAVITLKQGAGRLIRDEQDVGVLMICDPRLVDKPYGRRIWQSLPPFKRTRVQQEVEDF 640

Query: 661 LAAID 665
            A I+
Sbjct: 641 FALIN 645