Pairwise Alignments

Query, 665 a.a., ATP-dependent helicase DinG (RefSeq) from Shewanella amazonensis SB2B

Subject, 636 a.a., putative ATP-dependent DNA helicase YoaA from Escherichia coli ECRC98

 Score =  509 bits (1311), Expect = e-148
 Identities = 296/647 (45%), Positives = 378/647 (58%), Gaps = 22/647 (3%)

Query: 18  FDEGGLLSRFIRGYRRREVQQQMAEEVASCLSHTHKLVLEAGTGVGKTFAYLVPALLSGK 77
           F   G L++ I G++ RE Q+QMA  V   +     LV+EAGTG GKT+AYL PAL + K
Sbjct: 5   FAPDGQLAKAIPGFKPREPQRQMAVAVTQAIEKGQPLVVEAGTGTGKTYAYLAPALRAKK 64

Query: 78  QVIVSTGSKNLQEQLFYKDLPALLEMLKLHLPVSILKGRSNYLCQRLMAAQMEAAFSHDE 137
           +VI+STGSK LQ+QL+ +DLP + + LK    V++LKGRSNYLC   +  Q  A      
Sbjct: 65  KVIISTGSKALQDQLYSRDLPTVSKALKYTGNVALLKGRSNYLCLERLEQQALAGGDLPV 124

Query: 138 KLLDDLLKLNQFAQTTEDGDLGNLTGVAEDARAISLVASTQDSCTGQRCAFYEDCFTRKA 197
           ++L D++ L  ++  T DGD+     VAED++A  LV ST D+C G  C  Y+DCF  KA
Sbjct: 125 QILSDVILLRSWSNQTVDGDISTCVSVAEDSQAWPLVTSTNDNCLGSDCPMYKDCFVVKA 184

Query: 198 RARAMNARLIVVNHHLFFADRVLKDTGFAELLPDVDAVIFDEAHLLPDIAMQYFGAQLST 257
           R +AM+A ++VVNHHLF AD V+K++GF EL+P+ D +IFDEAH LPDIA QYFG  LS+
Sbjct: 185 RKKAMDADVVVVNHHLFLADMVVKESGFGELIPEADVMIFDEAHQLPDIASQYFGQSLSS 244

Query: 258 GSLRRLLDGIERLTEGELGDTQGLKLLPQRARIKLDAWQNCLLDAG-SSDFRQLLKDKTA 316
             L  L   I      EL DTQ L+    R       ++  L + G   + R+LL +   
Sbjct: 245 RQLLDLAKDITIAYRTELKDTQQLQKCADRLAQSAQDFRLQLGEPGYRGNLRELLANPQI 304

Query: 317 ALAAGELIAELSALEALLLANVGRSEPLDDFAVKLPELKQKLERFIACDDPGSAYSIDIG 376
             A   L   L     +   ++GRS  LD    +    + +L+R    + PG +Y  +  
Sbjct: 305 QRAFLLLDDTLELCYDVAKLSLGRSALLDAAFERATLYRTRLKRLKEINQPGYSYWYECT 364

Query: 377 ERHLMLRISPIDIAKACSELFSEDT-AWVFTSATLQVERSLQFFTRELGLTSAKPVSAKR 435
            RH  L ++P+ +A    EL ++   +W+FTSATL V   L  FT  LG+  A       
Sbjct: 365 SRHFTLALTPLSVADKFKELMAQKPGSWIFTSATLSVNDDLHHFTSRLGIEQA------- 417

Query: 436 SQSGAGAKSAVCKEVLLDSPFDYPRQSLLCVPRRLGSVANQDAMVCQLTEVCLKLIRAAK 495
                       + +LL SPFDY RQ+LLCVPR L    NQ     QL  +   +I A  
Sbjct: 418 ------------ESLLLPSPFDYSRQALLCVPRNLPQ-TNQPGSARQLAAMLRPIIEANN 464

Query: 496 GRTFILFTSHRMMEAVARSLVGRCHYPLLVQGQGGKQQLLSKFRQLGEAVLLGTGSFWEG 555
           GR F+L TSH MM  +A         P+L+QG+  K QLL +F   G A+L+ T SFWEG
Sbjct: 465 GRCFMLCTSHAMMRDLAEQFRATMTLPVLLQGETSKGQLLQQFVSAGNALLVATSSFWEG 524

Query: 556 VDVRGKLLSCVIIDKLPFASPDDSLYKARASRVEARGGDPFLEISLPQAVIALKQGAGRL 615
           VDVRG  LS VIIDKLPF SPDD L KAR      RGGDPF E+ LP AVI LKQG GRL
Sbjct: 525 VDVRGDTLSLVIIDKLPFTSPDDPLLKARMEDCRLRGGDPFDEVQLPDAVITLKQGVGRL 584

Query: 616 IRDETDRGVLVICDNRLVNRPYGQAFLQSLPPMARTRDLDEACAFLA 662
           IRD  DRGVLVICDNRLV RPYG  FL SLPP  RTRD+  A  FLA
Sbjct: 585 IRDADDRGVLVICDNRLVMRPYGATFLASLPPAPRTRDIARAVRFLA 631