Pairwise Alignments

Query, 331 a.a., membrane-bound lytic murein transglycosylase B (RefSeq) from Shewanella amazonensis SB2B

Subject, 438 a.a., lytic murein transglycosylase from Pseudomonas sp. SVBP6

 Score =  164 bits (415), Expect = 4e-45
 Identities = 96/298 (32%), Positives = 162/298 (54%), Gaps = 5/298 (1%)

Query: 29  FADYLAGLKDVAASQNQIRPQTLDTVF-PKIKEFRLAKSDTGEPAAAPATNLDTFLPQTL 87
           FA + AG +  A  Q  I   T D  F   I +  + K+D  +P       +  +L   L
Sbjct: 66  FAQWQAGFRQQAL-QAGINTNTFDRAFLGVIPDMDVIKADRSQPEFTRP--VWEYLDGAL 122

Query: 88  NDALVDEAKFQYQGHAETLNRIGKQYGVQPRFIVALWGLESRYGRESGVYPVLSVTASKA 147
           +   V   K   + HAE L++I ++YGV    +V++WG+ES +G+  G   V+   A+ A
Sbjct: 123 SPLRVRNGKGLLEKHAELLSQIEQRYGVDRNVLVSVWGMESNFGQFQGNKSVIRSLATLA 182

Query: 148 FNKEKEAFFREQFFAALKIIDSSSWQPDDLLATPDGRMGQPKLLPQAFLSAAKDGDDDGK 207
           +   + AF + Q  AAL+I+ +   QPD +  +  G MGQ + +P  + + A D D DG+
Sbjct: 183 YEGRRPAFAQAQLIAALQILQNGDIQPDAMKGSWAGAMGQTQFIPTTYNTHAVDFDGDGR 242

Query: 208 ADIWSNPADVFATLAYSLQQAGWREDETWGRQVKIPGDFDMSQAAAGNKKSFSQWQALGV 267
            DIW++ AD  A+ A+ LQ +GW+  E WG +V++   FD   A    +K+ S+W  +G+
Sbjct: 243 RDIWNSSADALASTAHYLQSSGWKRGEPWGFEVQLTPGFDYWLADGSQRKTVSEWMQMGL 302

Query: 268 RRFDGTDLPARAD-MKVEMVMPDGPKGRVYLVYDNYLALKRWHDSDYFALAVVHLSDR 324
           +   G  LPA ++ +   +++P G +G  +LV DN+ A+ ++++S  +A+AV  L  R
Sbjct: 303 KLPAGVRLPAGSEQLSAALLLPAGYRGPAFLVLDNFRAILKYNNSSSYAMAVGLLGQR 360