Pairwise Alignments

Query, 604 a.a., AsmA protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 736 a.a., cell envelope biogenesis protein AsmA from Pseudomonas simiae WCS417

 Score =  102 bits (255), Expect = 4e-26
 Identities = 98/408 (24%), Positives = 166/408 (40%), Gaps = 32/408 (7%)

Query: 2   KLIKWIFAGIAAIAVLVVLYITLIFDPNDFKPMLVDAVKEQTGRDLVIEEPLSWQFFPSI 61
           K++  +  G+  I V +   +T +FDPND+K  +    +++   +L +   + W  FP +
Sbjct: 6   KILGLVLLGLLLIIVALGFALTHLFDPNDYKDEIRQIARDKAHIELTLNGDIGWSLFPWL 65

Query: 62  GIRLAGVSLSN----PEGFKEAHMMAVKEVVAEVKLLPLLSRDVQIDQLRLDGAKLTLVT 117
           G+ L   S++      + F +  M+ +      V++LPLL R+VQ+  +R++G  L L  
Sbjct: 66  GLELHEASVATLTAPTQPFADLQMLGL-----SVRVLPLLRREVQMSDVRVEGLNLRLNR 120

Query: 118 TKQ--------GKSSLDGLTGNTTSADKPADVKQGPGLNAI--SIGGINISDTSITLIDE 167
            KQ        GK+  +   G+  S ++PA+ +       I   I  + I++  +   DE
Sbjct: 121 DKQGHGNWEDIGKNVTEATVGSPGSVEQPAETEPEKPSKPIRLDIDSLTINNARVEYNDE 180

Query: 168 AAGSSQTFTLSSLTLGEFTPGKAAP--LAFAFGADLPDMKVKGEGEATLTVSEAFNALSL 225
             G   +     L+ G    G + P  L   FG++ P M+VK E    L +  A      
Sbjct: 181 QTGKQFSAESIQLSAGAVHEGASIPVKLTAFFGSNQPVMRVKTELNGNLRIQRALKRYQF 240

Query: 226 VGLNLEVNAQGNSLPKGAVTVEFAGGADVALEAKTAKLTVDKLTLMDIEGKGAIAANYGK 285
             + +   A G  L    VT    G   V   A  A+ T  KL+   +   G +  N   
Sbjct: 241 EDMKITGEATGEPLQGKTVTFSTQGQLLVDQAANIAEWTNVKLSANQLRALGELKVNDLD 300

Query: 286 KVPFVDVELAFGAIDVDAILGTEKSQTKADSTAPDTAQKEPDLSGMKAVDAKLKLDIAAV 345
           K P +   L+    D+   L  +         A  +  K   +S +K     L L+   +
Sbjct: 301 KTPQLSGALSIAQFDLAKFL--DGVGHPLPPMAEGSLSKVELVSRLKGTPTSLALEDLNL 358

Query: 346 KVAG------LSTADWA---LRANLAGGVLKVDELKASLYGGKVGASA 384
           K+ G      L+  D+A   LR  L G     D    +      GA+A
Sbjct: 359 KLDGSTFTGRLAVEDFAKQSLRVQLKGDTFNADNYLPAKSESAKGAAA 406



 Score = 97.1 bits (240), Expect = 2e-24
 Identities = 114/458 (24%), Positives = 187/458 (40%), Gaps = 36/458 (7%)

Query: 151 SIGGINISDTSITLIDEAAGSSQTFTLSSLTLGEFTPGKAAPLAFAFGADLPDMKVKGEG 210
           ++G + ++D     +D+    S   +++   L +F  G   PL       L  +++    
Sbjct: 290 ALGELKVND-----LDKTPQLSGALSIAQFDLAKFLDGVGHPLPPMAEGSLSKVELVSRL 344

Query: 211 EATLTVSEAFNALSLVGLNLEVNAQGNSLPKGAVTVEFAGGADVALEAKTAKLTVDK-LT 269
           + T T      +L+L  LNL+++    S   G + VE      + ++ K      D  L 
Sbjct: 345 KGTPT------SLALEDLNLKLDG---STFTGRLAVEDFAKQSLRVQLKGDTFNADNYLP 395

Query: 270 LMDIEGKGAIAANYGKKVPFVDVELAFGAIDVDAILGTEKSQTKADSTAPDTAQKEPDLS 329
                 KGA AA           E+        A  GT          A  T +  P L+
Sbjct: 396 AKSESAKGAAAAR--------QAEVQNSEAGAMAAGGTTPLPDAPTKGAWSTDKLLP-LT 446

Query: 330 GMKAVDAKLKLDIAAVKVAGLSTADWALRANLAGGVLKVDELKASLYGGKVGASATLDGR 389
            ++ +D    L    + ++ L   +  L+A+   G LK+D L   LY G   A+ TLD R
Sbjct: 447 RLRTLDVNADLAFGQLTLSKLPIQNAVLKASGVDGQLKLDTLSGGLYNGSFQANGTLDVR 506

Query: 390 KVPAVYSFNKAITGVQILPLLKDAAEVDLLAGTANFDIQGKGAGLLADNIKRNLNANGKF 449
           +   V +    I  V +  +L+   +   + G    D    G G     +  +LN    F
Sbjct: 507 QDIPVLALQSHIKQVPVERILQAQGQNPPVKGQVTLDSNLTGRGNSQKALIDSLNGTASF 566

Query: 450 EVADGALYGVNVPQMIRDAQAKL-KGDLNAAAGGEEKKTDFSSLTGSLNIAAGKANNPDL 508
            + +G L   N+ Q +    A L +  L++   G  K T F  L G+L    G A+NPDL
Sbjct: 567 VINNGVLLNANLEQQLCTGIALLNRKTLSSTPQG--KDTPFQELKGNLTFRNGVASNPDL 624

Query: 509 LMLSPLLRISGQGGADLMAETLDYKLATKVVGSLEGQGGDTA------LAGIEIPLAITG 562
            +  P L ++G G  DL    +DY++   V G  + +  D A        GIE+PL   G
Sbjct: 625 KVRIPGLTVNGNGDVDLRVLGMDYRVGIIVEGD-QRETPDPACQVGSNFQGIEVPLRCRG 683

Query: 563 SFTEPKFA--LDTEALLKGQLKGETDKLKDKLKDSLFK 598
                  A  LD + L +  +K   ++L +KL++ L K
Sbjct: 684 PLELGAKACRLDKDGLGQVAIKAAGNRLNEKLEEKLDK 721