Pairwise Alignments

Query, 815 a.a., acyl-CoA dehydrogenase (RefSeq) from Shewanella amazonensis SB2B

Subject, 815 a.a., Acyl-coenzyme A dehydrogenase from Pseudomonas sp. DMC3

 Score =  790 bits (2039), Expect = 0.0
 Identities = 412/811 (50%), Positives = 549/811 (67%), Gaps = 19/811 (2%)

Query: 4   LLWSIALLVVLGACAYLRVSLLTATAAAAIMLTA--------GWTLDVVGLWGGIIFLII 55
           LLW + L+V +   A+ R++ L A    A  L A        GW L V   W  ++  ++
Sbjct: 3   LLWILVLIVGVAYLAHRRIAPLPALGIVAAYLVAMGIFSHAPGWLLFV--FW--VLLAVV 58

Query: 56  ALPLNISSIRQSLITRPLLKVYRGIMPEMSSTEKEAIDAGTTWWEADLFAGNPNWKKLHN 115
           A PL +  +R+   T PL   ++  +P MS TE++AIDAGT WW+ +LF+G P+W KL +
Sbjct: 59  AAPLLLPDLRRKHFTAPLFNWFQKTLPPMSQTERDAIDAGTVWWDGELFSGRPDWDKLLS 118

Query: 116 YPTARLSAEEQAFIDGPVNEVCRMVNEHQVSHQFADLPADVWQYLKDNGFFAMIIKKKYG 175
           YP  +L+ EEQAFIDGP  E+C MV++ Q+  Q  DLP + W ++K++GFFA+II K+YG
Sbjct: 119 YPKVQLTEEEQAFIDGPTEELCAMVSDWQIG-QSMDLPPEAWTHIKEHGFFALIIPKEYG 177

Query: 176 GLEFSAYAQSRVLQKLAGVSSELASTVGVPNSLGPGELLQHYGTAEQQDHYLPRLAKGLE 235
           G  FSAYA S+V  KLA  S +LASTV VPNSLGP ELL HYGT EQ++HYLPRLA+G +
Sbjct: 178 GKGFSAYAHSQVAMKLATRSGDLASTVMVPNSLGPAELLLHYGTDEQRNHYLPRLARGDD 237

Query: 236 VPCFALTSPEAGSDAGSIPDYGVVCKGMWKGEEVLGMKLTWNKRYITLAPIATVLGLAFK 295
           +PCFALT P AGSDAG++PD G++CKG W+G+EV+G++L W KRYITL P+AT+LGLAFK
Sbjct: 238 IPCFALTGPLAGSDAGAMPDTGIICKGQWEGQEVIGLRLNWEKRYITLGPVATLLGLAFK 297

Query: 296 LRDPERLLGGEEELGITCALIPTDVEGVETGRRHFPLNCMFQNGPTRGKDVFVPLSFIIG 355
             DP+ LLG EE+LGI+ ALIPTD  GVE GRRH PL   F NGP  GKDVF+PL ++IG
Sbjct: 298 AYDPDHLLGEEEDLGISLALIPTDTAGVEIGRRHLPLGAAFMNGPNSGKDVFIPLDYLIG 357

Query: 356 GPKMAGQGWRMLVECLSVGRGITLPSNSAGGVKTAALATGAYARIRRQFKLPIGKLEGIE 415
           G +M G+GW ML+ CLSVGR I+LP+   G  K  +L TG YA+IR QF +P+   EGI+
Sbjct: 358 GQEMLGKGWMMLMNCLSVGRSISLPAVGTGAAKFTSLVTGQYAQIREQFNVPLSAFEGIQ 417

Query: 416 EPMARIGGNAYLMDAVTSLTTTGIDLGEKPSVISAIVKYHLTDRMQKCVIDAMDIHGGKG 475
           E MARIGGNA++MDA   LT   +DLGEKPSV+SAI+KYHLT+R ++C+  AMD+HGGK 
Sbjct: 418 EAMARIGGNAWMMDAARMLTANAVDLGEKPSVLSAILKYHLTERGRECISHAMDVHGGKA 477

Query: 476 VCLGPNNYLGRGYQAAPIAITVEGANILTRSMIIYGQGAIRCHPYVLAEMDSAFDKDVRQ 535
           + +GPNNYLGR +  API ITVEGANIL+R+++I+GQGAIRCHP+VL EM  A  +D  Q
Sbjct: 478 IIMGPNNYLGRSWNGAPIFITVEGANILSRNLMIFGQGAIRCHPFVLKEMALAGRQDKDQ 537

Query: 536 GLNKFDAALFGHIGFTISNLIRSVWMGLTGSRFSNAPYGDKTKRYYQHMNRFSANLALLS 595
            L +FD  L  HIGF +SN   ++ + L    F +AP    ++ Y++ +NR +A  A+L+
Sbjct: 538 ALKEFDGLLLKHIGFAVSNAASTLVLNLGLGHFEHAPGDRISQGYFRALNRQAAAFAMLA 597

Query: 596 DLAMATLGGNLKRKERISARLGDMLSQLYLASATLKRYQDEGRQTEDLPLVQWAVEDALF 655
           D +M  LGG LKR+ER+SARLGD+LS LYLASA LKRY D        PL +WA+E++L 
Sbjct: 598 DFSMMLLGGELKRRERLSARLGDVLSNLYLASAALKRYHDLDSPAYMEPLFRWAMEESLG 657

Query: 656 KLQASLDELLDNFPAGL-GGVLRVLLLPFGRPLKRPSDVLDHKVAKIMQTPCA--SRERL 712
           + + +LDELL NFP  + G +LRV++ PFGR  K PSD L  +VA ++       + E L
Sbjct: 658 QSERALDELLSNFPNKVFGCLLRVIVFPFGRRHKGPSDKLGAEVAGVIGRAKGDPALEEL 717

Query: 713 GQGQFWEACDNNPVGVQEQTFKDILAAEPLYDKVCKA--AGKRLPFMWLDQVAAEGKALG 770
             G +     ++ VG  +     + AA+PL+ K+  A  +G+  P      + A  +A G
Sbjct: 718 LAGCYRPQSADDAVGALQHASDLLNAAQPLHKKLHTALKSGQVKPAAGEHAIDAALEA-G 776

Query: 771 ILSDAEIALLEKAEIGRMKSINVDDFDPAEL 801
           +L   E   L  AE  R K I+VDDF   EL
Sbjct: 777 VLQAVEAQSLRDAEAARRKVIDVDDFAKEEL 807