Pairwise Alignments

Query, 815 a.a., acyl-CoA dehydrogenase (RefSeq) from Shewanella amazonensis SB2B

Subject, 841 a.a., acyl-CoA dehydrogenase from Pseudomonas fluorescens SBW25

 Score =  764 bits (1972), Expect = 0.0
 Identities = 396/807 (49%), Positives = 541/807 (67%), Gaps = 15/807 (1%)

Query: 4   LLWSIALLVVLGACAYLRVSLLTATAAAAIMLTAGWTLDVV-GLWGGIIFLIIALP---L 59
           ++W +  + +  A AY +        A  + L AG+  +VV G+   +  +++ LP   +
Sbjct: 2   VIWLLVGVAIAIALAYRQAVATLWLGAGLLWLAAGYLFNVVAGVGTAVAAILVVLPALLM 61

Query: 60  NISSIRQSLITRPLLKVYRGIMPEMSSTEKEAIDAGTTWWEADLFAGNPNWKKLHNYPTA 119
            I  +R+S++T   L ++R IMP MS TE+ AI++GT WW+A+LF+G PNW++L     A
Sbjct: 62  TIKPLRRSVLTSRALGLFRTIMPAMSDTERAAIESGTVWWDAELFSGKPNWQRLLQAAPA 121

Query: 120 RLSAEEQAFIDGPVNEVCRMVNEHQVSHQFADLPADVWQYLKDNGFFAMIIKKKYGGLEF 179
            LSAEEQAF+D  V  +C + N+ + +  + D+  + WQY KD GF  MII K+YGG  F
Sbjct: 122 SLSAEEQAFLDNEVETLCDIANDWETTQVWQDMSPEGWQYTKDAGFLGMIIPKQYGGKGF 181

Query: 180 SAYAQSRVLQKLAGVSSELASTVGVPNSLGPGELLQHYGTAEQQDHYLPRLAKGLEVPCF 239
           S YA S+V+ KL+   S  A +V VPNSLGP ELL HYGT  Q+++YLPRLA+G ++PCF
Sbjct: 182 SHYAHSQVIMKLSTRCSAAAISVMVPNSLGPAELLLHYGTDAQRNYYLPRLARGEDIPCF 241

Query: 240 ALTSPEAGSDAGSIPDYGVVCKGMWKGEEVLGMKLTWNKRYITLAPIATVLGLAFKLRDP 299
           ALTSP AGSDAG+IPD G+VCKG+ +G+EVLG ++TW+KRYITL PIATVLGLAF+  DP
Sbjct: 242 ALTSPYAGSDAGAIPDLGIVCKGLHEGQEVLGFRVTWDKRYITLGPIATVLGLAFRAEDP 301

Query: 300 ERLLGGEEELGITCALIPTDVEGVETGRRHFPLNCMFQNGPTRGKDVFVPLSFIIGGPKM 359
           + LLG    LGITCALIPT   GV +GRRH+PLN +FQNGPT GKDVF+PL ++IGG + 
Sbjct: 302 DGLLGQPGSLGITCALIPTSHPGVNSGRRHWPLNAVFQNGPTTGKDVFIPLEWVIGGREQ 361

Query: 360 AGQGWRMLVECLSVGRGITLPSNSAGGVKTAALATGAYARIRRQFKLPIGKLEGIEEPMA 419
            G GWRML+ECL+ GR I+LPS++ G  K A   T AYA +R+QF LPIGK EG++ P+A
Sbjct: 362 IGNGWRMLMECLAAGRAISLPSSNVGLGKVAVRGTTAYAAMRKQFGLPIGKFEGVQAPLA 421

Query: 420 RIGGNAYLMDAVTSLTTTGIDLGEKPSVISAIVKYHLTDRMQKCVIDAMDIHGGKGVCLG 479
           R+ G+ Y  DAV  ++   +D GEKPSVISAI KYH+T+R +  V D MDI  GKG+C+G
Sbjct: 422 RMAGHLYACDAVRKVSVASLDAGEKPSVISAIAKYHVTERARMIVNDGMDIVAGKGICMG 481

Query: 480 PNNYLGRGYQAAPIAITVEGANILTRSMIIYGQGAIRCHPYVLAEMDSAFDKDVRQGLNK 539
           PNN+L R YQ +PIAITVEGANI+TR +II+GQG IRCHPYV +EM++A + D R+ L  
Sbjct: 482 PNNFLARAYQQSPIAITVEGANIMTRCLIIFGQGLIRCHPYVFSEMEAARNPDRRKALED 541

Query: 540 FDAALFGHIGFTISNLIRSVWMGLTGSRFSNAP--YGDKTKRYYQHMNRFSANLALLSDL 597
           FD A+FGH+ F ++N +R+    LTG R  +AP         YY+ +NR S  LAL+SD+
Sbjct: 542 FDRAMFGHVSFVLANTVRAAVHALTGGRLLSAPAKTDPALASYYRQVNRLSVVLALISDI 601

Query: 598 AMATLGGNLKRKERISARLGDMLSQLYLASATLKRYQDEGRQTEDLPLVQWAVEDALFKL 657
           +M  LGG LKRKE I+ RLGD+LSQLY+ S  LKR++D+ R   DLPLV W+ +DAL + 
Sbjct: 602 SMGVLGGALKRKESITGRLGDILSQLYIVSCVLKRFEDDDRPQADLPLVHWSAQDALLRA 661

Query: 658 QASLDELLDNFPAGLGG-VLRVLLLPFGRPLKRPSDVLDHKVAKIMQTPCASRERLGQGQ 716
             +L E+LDN+P+     V+R L  PFG PL++PSD L  +VA ++QTP  +R+RL    
Sbjct: 662 HEALAEVLDNYPSKAAAVVIRALTFPFGIPLRKPSDRLLAQVADVVQTPGDTRDRLLANS 721

Query: 717 FWEACDNNPVGVQEQTFKDILAAEPLYDKVCKAAGKR--LPFMWLDQVA-----AEGKAL 769
           +    + + +   E  F+ +L    L +   K+A K+  +  M +   A      + +AL
Sbjct: 722 YVPRPEIDKLAYGELGFR-LLPQVELIEARLKSAVKQGLIEPMPISATAFTVWRVKARAL 780

Query: 770 GILSDAEIALLEKAEIGRMKSINVDDF 796
            ++SD E  LL +        I VDDF
Sbjct: 781 DLISDEEDTLLGRYVEYADHGIQVDDF 807