Pairwise Alignments

Query, 1030 a.a., DNA-directed DNA polymerase (RefSeq) from Shewanella amazonensis SB2B

Subject, 1117 a.a., error-prone DNA polymerase from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  767 bits (1980), Expect = 0.0
 Identities = 481/1093 (44%), Positives = 634/1093 (58%), Gaps = 96/1093 (8%)

Query: 2    YAELHAISNYSFLRGASHPHELVAEAARLGYSAIAITDECSVAGVVKAHMA--------- 52
            YAEL   SN+SFLRGASHP +LV  A   G+S + + D  +V+GVV+A  A         
Sbjct: 6    YAELATASNFSFLRGASHPKDLVLTAILRGHSGLGLADRNTVSGVVRAWSALRTIREDGL 65

Query: 53   -----AVDAG---------------------------ISLIVGSEFRLQQGTFVLLA--T 78
                   D G                             L  G+      GT  ++A   
Sbjct: 66   SPPDVVRDGGGPGEVIYVEDPLNDPALSQMVKDRAATFKLATGARLVFNDGTPDIIAYPE 125

Query: 79   SRAGYGALCRLISRGRRRAPKGEYRINLDDLLSPLPDCVLLWRPPMPQNPGTDIAATEQH 138
            +RAG+G L RL++ G RRA KG+  I L DLL+   D +L+  P    + G D       
Sbjct: 126  TRAGWGRLTRLLTLGNRRAVKGQCEIGLRDLLAASEDLLLILMPDARLD-GVD------- 177

Query: 139  WFATQKQLAKQLTPWQGRRYLLAEQCLEAAGSLWQRYLMRLSGLCDIPCVAAGDVRMHSA 198
                 K LA+      G  +L A    +         L  LS     P +A  +V  H A
Sbjct: 178  -----KVLAQLTDASPGAVWLGAVMGRKGDDRRRLSRLKTLSERSGAPLLAVNNVLYHDA 232

Query: 199  ARQPLLDVLTCIRLGLRLDEAEGHLCQNAEHYLRPLGSIHR--RYPQEWIANTQKIASQC 256
             ++ L DVLTCIR G+ +++A   L  NAE +L+P   + R  R   E +  TQ + S+ 
Sbjct: 233  IQRDLQDVLTCIREGVTIEDAGRRLNANAERWLKPPAEMARLFRDAPEALVETQHVLSRI 292

Query: 257  RFSMAELRYEYPAELVPAGFSASEYLAREVAKGARRRYGLAVPAAVKRQYLAELKLIHEL 316
             F + ++ Y+YP E  P   +   +L +   + A  RY   VP  VK     EL  I + 
Sbjct: 293  GFDLGDISYQYPEETTPPDETPQGWLEQLTWRHAEMRYPDGVPHKVKALLDKELIFIAKA 352

Query: 317  EYEYFFLTIYDIVRFARRKRILHQGRGSAANSVVCFCLGITEVDPTRVNMLFERFISKER 376
             Y  +FLTIYDIVR A  KRIL QGRGSAANS VC+ LGIT VDP   ++LFERF+S +R
Sbjct: 353  GYAPYFLTIYDIVRVANDKRILCQGRGSAANSAVCYVLGITAVDPAESDLLFERFLSTDR 412

Query: 377  HEPPDIDVDFEHERREEVIQYIYRKYGRHRAALAASVITYRLKSAMGEVGKVLGLDRELV 436
             EPPDIDVDFEHERREE+IQ+IY +YGR RA +AA+VI YR KSA+ +VGK LGL  ++ 
Sbjct: 413  GEPPDIDVDFEHERREEIIQHIYTRYGRARAGIAATVIRYRPKSAIRDVGKALGLTEDVT 472

Query: 437  ARLIQGI-----DRRDPSHPWREQLAAQLPSADMFGYLVQSLLGFPRHLSQHVGGFVISA 491
            ARL               H  +  L    P       L   LL FPRHLSQHVGGFV++ 
Sbjct: 473  ARLASSQWGSWGSEIGERHVKQAGLDPANPMIQRAVKLAMRLLNFPRHLSQHVGGFVLTQ 532

Query: 492  GPLAELVPVENAAMEDRTVIQWDKDDLEALGLLKVDVLALGMLTAIRKCFELI-SRHQQP 550
              L ELVP+ NAAM DRT I+WDKDD++AL L+KVDVLALGMLT IRK F+LI + H   
Sbjct: 533  DRLDELVPIGNAAMPDRTFIEWDKDDIDALRLMKVDVLALGMLTCIRKAFDLIRAHHGDD 592

Query: 551  FGMRSIKAEDPNVYRMLSRGDSMGVFQVESRAQTSMLPRLRPACYYDLVIQIAIVRPGPI 610
            + + +I  +DP VY ML +GDS+GVFQVESRAQ +MLPRL+P   YDLVIQ+AIVRPGPI
Sbjct: 593  WALHTIPRDDPAVYDMLCKGDSIGVFQVESRAQINMLPRLKPRRLYDLVIQVAIVRPGPI 652

Query: 611  QGDMVHPFLRRRKGLE-------AVTYPSEAVKAVLERTMGVPIFQEQVIKLAMVAAGFS 663
            QGDMVHP+LRRR GLE          YP + ++ VL++T+GVP+FQEQ +K+AMVAA F+
Sbjct: 653  QGDMVHPYLRRRNGLEEPEYSKPGPQYPHDELEQVLKKTLGVPLFQEQAMKVAMVAAEFN 712

Query: 664  GGEADALRRAMASWKHTGKLWSFEQKLLDGMAARGYSEDFARQIFRQIQGFGEYGFPESH 723
              EA+ LR+AM +++  G L ++E +++  M  RGY   FA++ F QI+GFG YGFPESH
Sbjct: 713  EKEANGLRKAMGTFRGDGTLHNYEDRMVGRMIERGYDPTFAQRCFDQIKGFGSYGFPESH 772

Query: 724  SASFALLAYVSAYLKLYHPAAFCCALLNSQPMGFYSPSQLLQDVRRHGVEVFDVCINHSQ 783
            +ASFA L YVS+++K ++PAAF CALLNSQPMGFY+P+QL++D R HGVEV  V +++S 
Sbjct: 773  AASFAQLVYVSSWIKHHYPAAFACALLNSQPMGFYAPAQLVRDAREHGVEVRPVDVSYSG 832

Query: 784  WDSSLVKTATGFAIRLGFRQVKGLKEQAMQRLVDVRSAAGFAHLSEISMLLDRHAL---- 839
            W++SL  +    A+R+G RQ++G +E   + L   R+ +    LS I  L  R AL    
Sbjct: 833  WNNSLEGSDRTPALRIGLRQIEGFREDWAEALAAARAFS----LSNIETLARRAALSSAA 888

Query: 840  -ELLAAADAFRLLSGHRFQSRWQLSARQASLPLFDDLPEPL------KPVGTEPSLDAP- 891
               LA ADAFR L   R ++ W      A   L DD P PL      + +G EP    P 
Sbjct: 889  MRKLADADAFRSLGLDRREALW------AVRRLPDDAPLPLFAAADARELGAEPDARLPV 942

Query: 892  -NAVQCLKADYRSKGLSLGQHPMALLRIAGLLGKSLTAKALENTRHGQLVTVAGVVTGRQ 950
                + + ADY++  LSL  HPMA+LR        L     +  R G LV VAGVV  RQ
Sbjct: 943  MPLGEHVAADYQTLRLSLKAHPMAILRPIFEAEGLLNCAQTDARRGGALVRVAGVVLVRQ 1002

Query: 951  RPGTASGVTFITLEDETGNTNLIVWMGTARAQRKPYLTSTILKVSGTVEHA-DGVTHVVA 1009
            RPG  + + F+TLEDETG  N+++W       R+  + + ++ V G VE + +GV H+VA
Sbjct: 1003 RPGKGNAI-FVTLEDETGIINVVLWARMFEQFRREVMAARLMAVEGVVEKSPEGVVHLVA 1061

Query: 1010 GRLEDISHLLDSL 1022
             R+ D S  L  L
Sbjct: 1062 RRVIDRSSELSRL 1074