Pairwise Alignments

Query, 664 a.a., thiamine biosynthesis protein ThiC (RefSeq) from Shewanella amazonensis SB2B

Subject, 627 a.a., Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) from Variovorax sp. SCN45

 Score =  822 bits (2123), Expect = 0.0
 Identities = 414/653 (63%), Positives = 493/653 (75%), Gaps = 50/653 (7%)

Query: 11  AQDFIDNLKPLRR---PNSEKIFIEGSRPDIQVGMRQIHQTDTRIVNTRGEETFEANPPI 67
           A D   +L  L R   P S K  I GSRPD+ V +R     D R+ N  GE        +
Sbjct: 3   APDKFTSLLSLTREPFPASHKCLIPGSRPDLNVPVR-----DVRLTN--GET-------V 48

Query: 68  KVYDCAGPYSDPNADINVRRGLPKLREGWILARSDTEELNSASSNFTQQRLADDGLDHLR 127
            +YD +GPY+DP  +I+VRRGLP +R  W++ R DTE     + +       ++  D  R
Sbjct: 49  SLYDTSGPYTDPKVEIDVRRGLPDVRGAWVVERGDTESYEGRTHHALDDGAKNEDRDAQR 108

Query: 128 FDVLP--------KPRRAKAGKRVTQLHYARQGIITPEMEYIAIRENMARDEVTDEQLNR 179
              L         +PRRAK+G  VTQ+HYAR+GI+TPEMEY+A+REN  R+ + +   N 
Sbjct: 109 LAELRAGASALQRQPRRAKSGANVTQMHYARRGIVTPEMEYVALRENGKREWMAEYLANE 168

Query: 180 KKP----GEAFGALVSKPITPEFVRDEVARGRAIIPANINHPEAEPMIIGRNFLVKVNAN 235
           ++     G   GA + + ITPEFVRDEVARGRAIIPANINHPE EPM IGRNF VK+NAN
Sbjct: 169 ERAKRVMGNPMGASIPRIITPEFVRDEVARGRAIIPANINHPEVEPMAIGRNFKVKINAN 228

Query: 236 IGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWIVRNSPVPIGTVPIYQA 295
           IGNSAVTSSIEEEVEKLVW+ RWGAD VMDLSTG+ IH TR+WIVRNSPVPIGTVPIYQA
Sbjct: 229 IGNSAVTSSIEEEVEKLVWAIRWGADNVMDLSTGKNIHTTRDWIVRNSPVPIGTVPIYQA 288

Query: 296 LEKVNGIAEDLNWEVFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIM 355
           LEKV G+AEDL WE++RDTLIEQAEQGVDYFTIHAG+ L ++ +TA R+TGIVSRGGSIM
Sbjct: 289 LEKVGGVAEDLTWEIYRDTLIEQAEQGVDYFTIHAGLRLPFIHLTADRMTGIVSRGGSIM 348

Query: 356 AKWCLSHHQENFLYTHFRDICELCAAYDVSLSLGDGMRPGSIADANDEAQFAELETLGEL 415
           AKWC++HH+E+FLYTHF DIC++  AYDVS SLGDG+RPGS ADANDEAQFAEL TLGEL
Sbjct: 349 AKWCIAHHKESFLYTHFEDICDIMKAYDVSFSLGDGLRPGSGADANDEAQFAELRTLGEL 408

Query: 416 VKIAWEYDVQTIIEGPGHIPMQLIKENMDKQLEHCAEAPFYTLGPQTTDIAPGYDHFTSG 475
            +IAW++DVQT+IEGPGH+PM +I+ NMD+QL+HC EAPFYTLGP T DIAPGYDH  S 
Sbjct: 409 TQIAWKHDVQTMIEGPGHVPMHMIQSNMDEQLKHCHEAPFYTLGPLTIDIAPGYDHIASA 468

Query: 476 IGAAMIAWYGCAMLCYVTPKEHLGLPNKEDVKQGLIAYKIAAHAADVAKGHPGAQIRDNA 535
           IGAAMI W G AMLCYVTPKEHLGLP+++DVKQG+IAYKIAAHAADVAKGHPGA+ RD+A
Sbjct: 469 IGAAMIGWAGTAMLCYVTPKEHLGLPDRDDVKQGIIAYKIAAHAADVAKGHPGARSRDDA 528

Query: 536 LSKARFEFRWEDQYNLGLDPDTARAYHDETLPQESAKVAHFCSMCGPKFCSMKITQDVRD 595
           LSKARFEFRW+DQ+NLGLDPDTAR +HDETLP++S+KVAHFCSMCGPKFCSMKITQ+VR+
Sbjct: 529 LSKARFEFRWQDQFNLGLDPDTAREFHDETLPKDSSKVAHFCSMCGPKFCSMKITQEVRE 588

Query: 596 YAASLENAARSEADSVQTLEVGAAESYSKAESYARAGMDKMSATFKQTGSALY 648
           YAA                + G AE+ +  E     GM++ S  F   G  +Y
Sbjct: 589 YAA----------------KKGVAEAEAMTE-----GMEEKSKEFMAGGGEIY 620