Pairwise Alignments

Query, 664 a.a., thiamine biosynthesis protein ThiC (RefSeq) from Shewanella amazonensis SB2B

Subject, 635 a.a., Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  806 bits (2083), Expect = 0.0
 Identities = 411/646 (63%), Positives = 481/646 (74%), Gaps = 61/646 (9%)

Query: 24  PNSEKIFIEGSRPDIQVGMRQIHQTDTRIVNTRGEETFEANPPIKVYDCAGPYSDPNADI 83
           P S K+++ G +P ++V MR+I  T+       GE        + VYD +GPYS+P+  I
Sbjct: 20  PASRKLYVPGQQPGVRVPMREIALTN-------GER-------VVVYDTSGPYSEPSTMI 65

Query: 84  NVRRGLPKLREGWILARSDTEELNSASSNFTQQRLADDGLDHL---------RFDVLPK- 133
           +V RGLP +R  WI +R DTE     +     +++ DDG+ +          R + L   
Sbjct: 66  DVTRGLPDVRGAWIASRGDTETYAGRA-----RQVLDDGVKNEARQNDTTIERIEALRAQ 120

Query: 134 -------PRRAKAGKRVTQLHYARQGIITPEMEYIAIRENMARDEVT----DEQLNRKKP 182
                  PRRAK+G  VTQ+HYAR+GI+TPEMEY+A+REN  R+ +     D     +  
Sbjct: 121 AAGLQRTPRRAKSGMNVTQMHYARRGIVTPEMEYVAVRENGKREWMAEYLGDTAREARLR 180

Query: 183 GEAFGALVSKPITPEFVRDEVARGRAIIPANINHPEAEPMIIGRNFLVKVNANIGNSAVT 242
           G   GA +   ITPEFVRDEVARGRAIIPANINHPE EPM IGRNFLVKVNANIGNSAVT
Sbjct: 181 GNPMGARIPDIITPEFVRDEVARGRAIIPANINHPEVEPMAIGRNFLVKVNANIGNSAVT 240

Query: 243 SSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWIVRNSPVPIGTVPIYQALEKVNGI 302
           SSIEEEV+KLVW+ RWGAD VMDLSTGR IH TR+WIVRNSPVPIGTVPIYQALEKV G+
Sbjct: 241 SSIEEEVDKLVWAIRWGADNVMDLSTGRNIHTTRDWIVRNSPVPIGTVPIYQALEKVGGV 300

Query: 303 AEDLNWEVFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIMAKWCLSH 362
           AEDL W ++RDTLIEQAEQGVDYFTIHAGV L Y+ +TA R TGIVSRGGSIMAKWC++H
Sbjct: 301 AEDLTWAIYRDTLIEQAEQGVDYFTIHAGVRLAYIHLTANRRTGIVSRGGSIMAKWCITH 360

Query: 363 HQENFLYTHFRDICELCAAYDVSLSLGDGMRPGSIADANDEAQFAELETLGELVKIAWEY 422
           H+E+FLY +F +ICE+  AYDVS SLGDG+RPGS ADANDEAQFAEL+TLGEL + AW++
Sbjct: 361 HRESFLYENFDEICEIMKAYDVSFSLGDGLRPGSAADANDEAQFAELKTLGELTQTAWKH 420

Query: 423 DVQTIIEGPGHIPMQLIKENMDKQLEHCAEAPFYTLGPQTTDIAPGYDHFTSGIGAAMIA 482
           DVQT+IEGPGH+PM LI+ NMD+QL+HC EAPFYTLGP T DIAPGYDH  S IGAAMI 
Sbjct: 421 DVQTMIEGPGHVPMHLIQANMDEQLKHCHEAPFYTLGPLTIDIAPGYDHIASAIGAAMIG 480

Query: 483 WYGCAMLCYVTPKEHLGLPNKEDVKQGLIAYKIAAHAADVAKGHPGAQIRDNALSKARFE 542
           W G AMLCYVTPKEHLGLP+++DVKQGLIAYKIAAHAAD+AKGHPGA+ RD+A+SKARFE
Sbjct: 481 WMGTAMLCYVTPKEHLGLPDRDDVKQGLIAYKIAAHAADIAKGHPGARARDDAMSKARFE 540

Query: 543 FRWEDQYNLGLDPDTARAYHDETLPQESAKVAHFCSMCGPKFCSMKITQDVRDYAASLEN 602
           FRW DQ+NLGLDPDTAR +HDETLP++S+K AHFCSMCGPKFCSMKITQDVRDYA   E 
Sbjct: 541 FRWHDQFNLGLDPDTAREFHDETLPKDSSKEAHFCSMCGPKFCSMKITQDVRDYA---EK 597

Query: 603 AARSEADSVQTLEVGAAESYSKAESYARAGMDKMSATFKQTGSALY 648
              SE D +                    GM   SA FK  G A Y
Sbjct: 598 QGLSETDVL------------------ARGMAAKSAEFKAAGGAFY 625