Pairwise Alignments

Query, 664 a.a., thiamine biosynthesis protein ThiC (RefSeq) from Shewanella amazonensis SB2B

Subject, 644 a.a., phosphomethylpyrimidine synthase ThiC from Erwinia tracheiphila SCR3

 Score =  962 bits (2486), Expect = 0.0
 Identities = 478/660 (72%), Positives = 536/660 (81%), Gaps = 24/660 (3%)

Query: 2   SNRRETRKAAQDFIDNLKPLRRPNSEKIFIEGSRPDIQVGMRQIHQTDTRIVNTRGEETF 61
           S RRE R  AQ FI++L+    P S++I++ GSR DI+V +R+I  + T I  + G   F
Sbjct: 8   STRREQRAEAQQFIESLQGSAFPRSKRIYLTGSREDIRVPLREIQLSPTPIGGSGGNPQF 67

Query: 62  EANPPIKVYDCAGPYSDPNADINVRRGLPKLREGWILARSDTEELNSASSNFTQQRLADD 121
           E N P+ VYD AGPY DP A I+V+RGLP LR+ WI  R+DT+ +   SSN++QQRLADD
Sbjct: 68  EENEPVPVYDTAGPYGDPAAAIDVQRGLPSLRKNWIAERNDTQPIEHLSSNYSQQRLADD 127

Query: 122 GLDHLRFDVLPKPRRAKAGKRVTQLHYARQGIITPEMEYIAIRENMARDEVTDEQLNRKK 181
            LD LRF    + RRA  G+RVTQLHYARQG ITPEME+IA+RENM R  +  E+L  + 
Sbjct: 128 SLDSLRFAHRAQTRRATPGRRVTQLHYARQGTITPEMEFIALRENMGRSRILSEELLAQH 187

Query: 182 PGEAFGALVSKPITPEFVRDEVARGRAIIPANINHPEAEPMIIGRNFLVKVNANIGNSAV 241
           PG +FGA     IT EFVR EVA GRAIIPANINHPE+EPMIIGRNFLVK+NANIGNS V
Sbjct: 188 PGNSFGAQFPDTITAEFVRQEVAAGRAIIPANINHPESEPMIIGRNFLVKINANIGNSTV 247

Query: 242 TSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWIVRNSPVPIGTVPIYQALEKVNG 301
           +SSIEEEVEKLVW+ RWGADTVMDLSTGR IHETREWI+RNSPVPIGTVPIYQALEKVNG
Sbjct: 248 SSSIEEEVEKLVWAVRWGADTVMDLSTGRNIHETREWILRNSPVPIGTVPIYQALEKVNG 307

Query: 302 IAEDLNWEVFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIMAKWCLS 361
           IAE+L+W VFRDTL+EQAEQGVDYFTIHAGVLLRYVPMTAKR+TGIVSRGGSIMAKWCLS
Sbjct: 308 IAENLSWGVFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWCLS 367

Query: 362 HHQENFLYTHFRDICELCAAYDVSLSLGDGMRPGSIADANDEAQFAELETLGELVKIAWE 421
           HHQENFL+ HFR+ICE+CAAYDVSLSLGDG+RPGSI DANDEAQFAEL TLGEL  IAWE
Sbjct: 368 HHQENFLWQHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFAELRTLGELTNIAWE 427

Query: 422 YDVQTIIEGPGHIPMQLIKENMDKQLEHCAEAPFYTLGPQTTDIAPGYDHFTSGIGAAMI 481
           YDVQ +IEGPGH+PMQ+I+ NM +QLEHC EAPFYTLGP TTDIAPGYDHFTSGIGAAMI
Sbjct: 428 YDVQVMIEGPGHVPMQMIRRNMTEQLEHCHEAPFYTLGPLTTDIAPGYDHFTSGIGAAMI 487

Query: 482 AWYGCAMLCYVTPKEHLGLPNKEDVKQGLIAYKIAAHAADVAKGHPGAQIRDNALSKARF 541
            W+GCAMLCYVTPKEHLGLPNK+DVKQGLI YKIAAHAAD+AKGHPGAQIRDNA+SKARF
Sbjct: 488 GWFGCAMLCYVTPKEHLGLPNKKDVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARF 547

Query: 542 EFRWEDQYNLGLDPDTARAYHDETLPQESAKVAHFCSMCGPKFCSMKITQDVRDYAASLE 601
           EFRWEDQ+NL LDP TARAYHDETLPQES KVAHFCSMCGPKFCSMKITQ+VR+YAA  E
Sbjct: 548 EFRWEDQFNLALDPHTARAYHDETLPQESGKVAHFCSMCGPKFCSMKITQEVREYAARQE 607

Query: 602 NAARSEADSVQTLEVGAAESYSKAESYARAGMDKMSATFKQTGSALYSETHVEAALSTEK 661
             AR+       +EV               GM  MSA F++ G  LY    V A  S EK
Sbjct: 608 AEARA-------IEV---------------GMANMSAAFRERGGELYQP--VTAGSSEEK 643