Pairwise Alignments

Query, 664 a.a., thiamine biosynthesis protein ThiC (RefSeq) from Shewanella amazonensis SB2B

Subject, 631 a.a., Phosphomethylpyrimidine synthase from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  979 bits (2530), Expect = 0.0
 Identities = 482/645 (74%), Positives = 537/645 (83%), Gaps = 27/645 (4%)

Query: 4   RRETRKAAQDFIDNLKPLRRPNSEKIFIEGSRPDIQVGMRQIHQTDTRIVNTRGEETFEA 63
           RRE R  AQ FID L+    PNS++I+I G+ P ++V MR+I  + T I  ++ +  +E 
Sbjct: 8   RREQRARAQHFIDTLEGTAFPNSKRIYITGTHPGVRVPMREIQLSPTLIGGSKEQPQYEE 67

Query: 64  NPPIKVYDCAGPYSDPNADINVRRGLPKLREGWILARSDTEELNSASSNFTQQRLADDGL 123
           N  I VYD +GPY DP   INV++GL KLR+ WI AR DTEEL   SS++T+ RLADDGL
Sbjct: 68  NEAIPVYDTSGPYGDPQIAINVQQGLAKLRQPWIDARGDTEELTVRSSDYTKARLADDGL 127

Query: 124 DHLRFDVLPKPRRAKAGKRVTQLHYARQGIITPEMEYIAIRENMARDEVTDEQLNRKKPG 183
           D LRF  +  P+RAKAG+RVTQLHYARQGIITPEME+IAIRENM R+ +  E L  + PG
Sbjct: 128 DELRFSGVLTPKRAKAGRRVTQLHYARQGIITPEMEFIAIRENMGRERIRSEVLRHQHPG 187

Query: 184 EAFGALVSKPITPEFVRDEVARGRAIIPANINHPEAEPMIIGRNFLVKVNANIGNSAVTS 243
            +FGA + + IT EFVRDEVA GRAIIPANINHPE+EPMIIGRNFLVKVNANIGNSAVTS
Sbjct: 188 MSFGAHLPENITAEFVRDEVAAGRAIIPANINHPESEPMIIGRNFLVKVNANIGNSAVTS 247

Query: 244 SIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWIVRNSPVPIGTVPIYQALEKVNGIA 303
           SIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWI+RNSPVPIGTVPIYQALEKVNGIA
Sbjct: 248 SIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQALEKVNGIA 307

Query: 304 EDLNWEVFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIMAKWCLSHH 363
           EDL WE FRDTL+EQAEQGVDYFTIHAGVLLRYVPMTAKR+TGIVSRGGSIMAKWCLSHH
Sbjct: 308 EDLTWEAFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHH 367

Query: 364 QENFLYTHFRDICELCAAYDVSLSLGDGMRPGSIADANDEAQFAELETLGELVKIAWEYD 423
           QENFLY HFR+ICE+CAAYDVSLSLGDG+RPGSI DANDEAQFAEL TLGEL KIAWEYD
Sbjct: 368 QENFLYQHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFAELHTLGELTKIAWEYD 427

Query: 424 VQTIIEGPGHIPMQLIKENMDKQLEHCAEAPFYTLGPQTTDIAPGYDHFTSGIGAAMIAW 483
           VQ +IEGPGH+PMQ+I+ NM ++LEHC EAPFYTLGP TTDIAPGYDHFTSGIGAAMI W
Sbjct: 428 VQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTSGIGAAMIGW 487

Query: 484 YGCAMLCYVTPKEHLGLPNKEDVKQGLIAYKIAAHAADVAKGHPGAQIRDNALSKARFEF 543
           +GCAMLCYVTPKEHLGLPNKEDVKQGLI YKIAAHAAD+AKGHPGAQIRDNA+SKARFEF
Sbjct: 488 FGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARFEF 547

Query: 544 RWEDQYNLGLDPDTARAYHDETLPQESAKVAHFCSMCGPKFCSMKITQDVRDYAASLENA 603
           RWEDQ+NL LDP TARAYHDETLPQES KVAHFCSMCGPKFCSMKI+Q+VRDYAA+    
Sbjct: 548 RWEDQFNLALDPFTARAYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYAAT---- 603

Query: 604 ARSEADSVQTLEVGAAESYSKAESYARAGMDKMSATFKQTGSALY 648
                   QT+E+G A+               MS  F+  G  +Y
Sbjct: 604 --------QTIEMGMAD---------------MSENFRARGGEIY 625