Pairwise Alignments

Query, 224 a.a., response regulator receiver protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 235 a.a., Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain from Enterobacter asburiae PDN3

 Score =  135 bits (340), Expect = 7e-37
 Identities = 83/227 (36%), Positives = 125/227 (55%), Gaps = 5/227 (2%)

Query: 1   MNKILLVEDDNGFRELLTEALEREGLCVSVATDGFEALTLMEKDTPELILLDLMMPGMDG 60
           M +ILLVEDD+    LL   LE EG  ++   DG +AL  +EK   + ++LDLM+P +DG
Sbjct: 1   MKQILLVEDDHDIAALLRLNLEDEGYAITHEPDGGKALQRLEKQPWDAVILDLMLPNVDG 60

Query: 61  FSM---LMQRRNQLPVIVISALDSEEERIRGYQLGADDFLTKPFSIKELIVRIQALARRL 117
             +   + Q    LPVI+ISA  SE +RI G + GADD+L KPFS++ELI RI+AL RR 
Sbjct: 61  LEICRRIRQMTRYLPVIIISARSSETDRITGLETGADDYLAKPFSVQELIARIKALFRRQ 120

Query: 118 KRQ-DVPTHKEADTH-IHFDETRYTIGIGDRQVMLTQTEFKLFRYLFERKGQVVTKAELQ 175
           +      T  +   H +  D    ++ +  + V LT  EF+L  +     G+V ++  L 
Sbjct: 121 QAMGQAQTDGQIQAHGLTIDPLARSVLLHGQVVDLTPREFELLYFFARHPGEVFSRLALL 180

Query: 176 RSVLQKEFGRFDRNLDMHISNTRRKLAQTKLPRSMINTVRGQGYSFA 222
             V   +   ++  ++ HI+  R K+ +      +I TV G+GY FA
Sbjct: 181 EQVWGYQHEGYEHTVNTHINRLRIKIEKDAAEPEIIRTVWGKGYKFA 227