Pairwise Alignments

Query, 544 a.a., alpha amylase, catalytic region (RefSeq) from Shewanella amazonensis SB2B

Subject, 548 a.a., Alpha,alpha-phosphotrehalase (EC 3.2.1.93) (from data) from Pseudomonas simiae WCS417

 Score =  298 bits (764), Expect = 3e-85
 Identities = 193/538 (35%), Positives = 276/538 (51%), Gaps = 70/538 (13%)

Query: 7   WRGAAIYQIYPRSLKDSNGDGIGDLQGIIERLDYIASLNVDAIWISPFFRSPMKDFGYDI 66
           W+ + IYQIYP+S     G+  GDL GI+++LDY+  L VD +WI+PF RSP +D GYDI
Sbjct: 4   WQHSVIYQIYPKSFHSHAGNATGDLLGIVDKLDYLKWLGVDCLWITPFLRSPQRDNGYDI 63

Query: 67  SDYLDVDPMFGTMDDFDELIAKAHSLGLKVVIDQVLSHTSDEHAWFAESRQSRDNPKADW 126
           SDY  +DP +GTM D D LI++A   G+K+++D V++HTS EH WF ++R S DNP  D+
Sbjct: 64  SDYYAIDPSYGTMADCDLLISEAAKRGIKLMLDIVVNHTSIEHEWFQQARSSLDNPYRDF 123

Query: 127 YVWADPREDGTPPNNWLAIFGGCAWEWEPRRQQYYLHNFLKSQPDLNFHCEAVRQAVLNN 186
           Y+W D       PNNW + FGG AWE+E +  QY+LH F  +Q DLN+    VR  V   
Sbjct: 124 YIWRD------QPNNWESKFGGSAWEYEAQTGQYFLHLFDHTQADLNWDNPKVRAEVFKL 177

Query: 187 VEFWLKKGVDGFRLDAITFCFHDKALRDNPAK-PADKRQGRGFSEDNPYAYQYHWYNNER 245
           + FW  KGV GFRLD I        L   PA  P D   GR F  D P  ++Y       
Sbjct: 178 MRFWRDKGVGGFRLDVIN-------LISKPADFPEDNTDGRRFYTDGPNVHEY------- 223

Query: 246 PETLGFIEDLRALIDRYPGAVTLGEVSSEDSLATMAEYTRGDNR-LHMAYSFELLTKDYS 304
                 ++++   +      + +GE+SS  SL     Y+R +++ L M ++F  L  DY 
Sbjct: 224 ------LQEMHREVFEGHDLINVGEMSS-TSLEHCIRYSRPESKELSMTFNFHHLKVDYP 276

Query: 305 --AGYIRSTVEALE-----------GAIGDGWPCWAIGNHDVERVISRWG-QGKGTPQMA 350
               ++++  + L+              G GW      NHD  RV+SR+G  G+     A
Sbjct: 277 NLQKWVKADFDFLQLKQIFTDWQLGMQAGGGWNALFWCNHDQPRVVSRFGNDGEHRVVSA 336

Query: 351 KMLSAMLGCLRGSLCVYQGEELGLTEADIPFDALQDPFGIAFWPNF-------------- 396
           KML+  L  L+G+  VYQGEELG+T     FD ++    +     F              
Sbjct: 337 KMLATALHFLQGTPYVYQGEELGMTNPG--FDRIEQYRDVESLNIFRLKRDAGEPEASSM 394

Query: 397 -----KGRDGCRTPMPWQAEGEYMGFGATASGAMPWLPLPEEHRALNVAAQSANPDSVLN 451
                K RD  RTPM W A GE  GF    S   PW+ +P     +NV +Q  +PDSVL+
Sbjct: 395 AAIMQKSRDNGRTPMQWNA-GENAGF----STGEPWIGIPANAAQINVESQLDDPDSVLH 449

Query: 452 QFSRFMAWRRTQPALVTGEIK-FIDSKEPVLAFERVSSDKKVLCVFNLSDKPQTMTVP 508
            +   +A RR +P +  G  +  +     V A+ R    +++L + N    P  + +P
Sbjct: 450 HYRALIALRRHEPLIQEGVYRPLLQDHLRVWAYLREGHGERLLVLNNFYGTPCEIQLP 507