Pairwise Alignments

Query, 544 a.a., alpha amylase, catalytic region (RefSeq) from Shewanella amazonensis SB2B

Subject, 524 a.a., alpha-amylase family glycosyl hydrolase from Paraburkholderia sabiae LMG 24235

 Score =  398 bits (1022), Expect = e-115
 Identities = 211/505 (41%), Positives = 302/505 (59%), Gaps = 26/505 (5%)

Query: 1   MSIHPWWRGAAIYQIYPRSLKDSNGDGIGDLQGIIERLDYIASLNVDAIWISPFFRSPMK 60
           MS   WW+   IYQIYPRS +DSNGDGIGDL GI  RL+Y+A+L VDA+WISP + SPM 
Sbjct: 1   MSELAWWQRGVIYQIYPRSFQDSNGDGIGDLPGIRTRLEYLAALGVDAVWISPIYPSPMA 60

Query: 61  DFGYDISDYLDVDPMFGTMDDFDELIAKAHSLGLKVVIDQVLSHTSDEHAWFAESRQSRD 120
           DFGYD++DY +VDPMFGT+D+F +L+ +AH LGLKV++D V +H+SD H WF ESR SRD
Sbjct: 61  DFGYDVADYCNVDPMFGTLDEFKQLMDRAHQLGLKVLLDFVPNHSSDRHPWFEESRSSRD 120

Query: 121 NPKADWYVWADPREDGTPPNNWLAIFGGCAWEWEPRRQQYYLHNFLKSQPDLNFHCEAVR 180
           NPK DWY+W D   DG PPNNWL+  GG AWEW+    QYY H FL+ QPDLN+    VR
Sbjct: 121 NPKRDWYLWRDAAPDGGPPNNWLSRMGGSAWEWDEHTGQYYYHAFLREQPDLNWRNPQVR 180

Query: 181 QAVLNNVEFWLKKGVDGFRLDAITFCFHDKALRDNPAKPADKRQGRGFSEDNPYAYQ-YH 239
           +A+ + + FWL  GVDGFR+D +     D   RDNP  PA       +S   P  ++   
Sbjct: 181 RAMDDVLRFWLDLGVDGFRVDVLWLLIKDVQFRDNPPNPA-------YSAGEPEHHRLLQ 233

Query: 240 WYNNERPETLGFIEDLRALIDRYPGAVTLGEVSSEDSLATMAEY--TRGDNRLHMAYSFE 297
            Y  ++PE    +  +RA +  Y   V +GE+     +A + +Y    GD    M ++F+
Sbjct: 234 RYTEDQPEVHDIVRSMRATLREYGERVLIGEIYL--PVAQLVQYYGASGDG-ADMPFNFQ 290

Query: 298 LLTKDYSAGYIRSTVEALEGAIGD-GWPCWAIGNHDVERVISRWGQGKGTPQMAKMLSAM 356
           LL   ++A  + S ++A + A+ +  WP W +GNHD  RV SR G  +     A++ + +
Sbjct: 291 LLNAKWNARELASMIQAYDSALPEHAWPNWVLGNHDNPRVASRVGIAQ-----ARVAAVL 345

Query: 357 LGCLRGSLCVYQGEELGLTEADIPFDALQDPFGIAFWPNFKGRDGCRTPMPWQAEGEYMG 416
           L  LRG+  +Y GEE+G+T+  I  + +QDP  +      +GRD  RTPM W +   + G
Sbjct: 346 LLTLRGTPTLYYGEEIGMTDGAIALNEIQDPAELRQPGIGQGRDPERTPMQWDSSLPHAG 405

Query: 417 FGATASGAMPWLPLPEEHRALNVAAQSANPDSVLNQFSRFMAWRRTQPALVTGEIKFIDS 476
           F    +   PWLP+     A +V  +  +  S+L+ +   +  RR+   LV G I+ I +
Sbjct: 406 F----TQGRPWLPV---DTATSVRDEDNDVSSMLSLYRSLLVLRRSHAPLVQGTIENIAA 458

Query: 477 KEPVLAFERVSSDKKVLCVFNLSDK 501
              VL +ER   ++++    N++D+
Sbjct: 459 HGDVLTYERRYRNQRLFIALNMADE 483