Pairwise Alignments

Query, 544 a.a., alpha amylase, catalytic region (RefSeq) from Shewanella amazonensis SB2B

Subject, 547 a.a., alpha-amylase family glycosyl hydrolase from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  530 bits (1364), Expect = e-155
 Identities = 259/509 (50%), Positives = 331/509 (65%), Gaps = 15/509 (2%)

Query: 4   HPWWRGAAIYQIYPRSLKDSNGDGIGDLQGIIERLDYIASLNVDAIWISPFFRSPMKDFG 63
           H WWRGA +YQIYPRS  DSN DG+GDL GI + LD++ASL VD IW+SPFF SPMKDFG
Sbjct: 19  HDWWRGAVLYQIYPRSFADSNDDGVGDLNGITQHLDHVASLGVDGIWLSPFFTSPMKDFG 78

Query: 64  YDISDYLDVDPMFGTMDDFDELIAKAHSLGLKVVIDQVLSHTSDEHAWFAESRQSRDNPK 123
           YD+SDY DVDP+FGT+ DFD LI++AH+LGLKVVIDQV SHTSDEH WF +SR SR+   
Sbjct: 79  YDVSDYCDVDPIFGTLADFDALISRAHALGLKVVIDQVFSHTSDEHPWFTDSRASRNGDH 138

Query: 124 ADWYVWADPREDGTPPNNWLAIFGGCAWEWEPRRQQYYLHNFLKSQPDLNFHCEAVRQAV 183
           ADWYVWAD + DG+PP+NW ++FGG AW W+ RR QYY+HNFL SQP LN    AV+ A+
Sbjct: 139 ADWYVWADAKPDGSPPSNWQSVFGGPAWTWDARRGQYYMHNFLASQPQLNVRNPAVQDAL 198

Query: 184 LNNVEFWLKKGVDGFRLDAITFCFHDKALRDNPAKPADKRQGRGFSEDNPYAYQYHWYNN 243
           +    FWL +GVDGFRLDAI F  HD +LRDNP     K++ R      P+ +Q   YN 
Sbjct: 199 IAAARFWLDRGVDGFRLDAINFAIHDPSLRDNPPIQDGKKRTR------PFDFQDKIYNQ 252

Query: 244 ERPETLGFIEDLRALIDRYPGAVTLGEVSSEDSLATMAEYTRGDNRLHMAYSFELLTKDY 303
             P+ +GF+  +RAL D Y G  T+ EV  + +   M E+T G++RLH AY F  L  D 
Sbjct: 253 SHPDIIGFLNRIRALTDSYEGRFTVAEVGGDHADREMKEFTAGNDRLHSAYGFLYLYADT 312

Query: 304 SAGYIRSTVEAL-EGAIGDGWPCWAIGNHDVERVISRWGQGKGTPQMAKMLSAMLGCLRG 362
               +    + +     G+GWP W   NHD  R +SRW +G+     ++M   +L CLRG
Sbjct: 313 LKSELIGVGDGMWPDQQGEGWPSWTFSNHDAPRAVSRWAKGRDEKGFSEMALLLLMCLRG 372

Query: 363 SLCVYQGEELGLTEADIPFDALQDPFGIAFWPNFKGRDGCRTPMPWQAEGEYMGFGATAS 422
           ++ VYQGEELGL +A++PF+ L DP  IA WP   GRDG RTP+PW A     GF    S
Sbjct: 373 NVFVYQGEELGLPQAEVPFERLVDPEAIANWPETLGRDGARTPIPWVASAPNAGF----S 428

Query: 423 GAMPWLPLPEEHRALNVAAQSANPDSVLNQFSRFMAWRRTQPALVTGEIKFIDSKEPVLA 482
              PWLP+   H AL V AQ A+P S+L+   R +A R+  PAL TG ++ I+S   +L 
Sbjct: 429 TVEPWLPVDPRHLALAVDAQEADPTSILHAARRIIALRQAHPALRTGGLE-IESAGDLLV 487

Query: 483 ---FERVSSDKKVLCVFNLSDKPQTMTVP 508
              FER    +++LCVFNL  +    + P
Sbjct: 488 FRRFERPGGGERLLCVFNLGFEALDWSAP 516