Pairwise Alignments

Query, 683 a.a., alpha amylase, catalytic region (RefSeq) from Shewanella amazonensis SB2B

Subject, 554 a.a., alpha-amylase family protein from Paraburkholderia sabiae LMG 24235

 Score =  101 bits (251), Expect = 1e-25
 Identities = 97/363 (26%), Positives = 150/363 (41%), Gaps = 61/363 (16%)

Query: 231 GDLAGIEHRLDYLNDLGVTQLWLNPLLENRQPAYSYHGYAITDFYQIDARFGSNAQYQAL 290
           GD  G+  RLDYL  LGVT +WL P   +  P    +GY ++D+Y +D ++G+   +   
Sbjct: 29  GDFQGLVRRLDYLQGLGVTTIWLMPF--HPSPGRD-NGYDVSDYYNVDPKYGTLGDFSEF 85

Query: 291 VRKAADRGLGVIMDVVLNHMGSGHPWMQ------DLPFNDWVNPRSMHTSHRRTAVQDP- 343
               A RGL VI+D+V+NH    HPW +      D  + DW        ++    V  P 
Sbjct: 86  THACAQRGLRVIIDLVVNHTSDQHPWFKQARSDPDSKYRDWYVWSDSKPTNANRGVAFPG 145

Query: 344 -----YAAPKDAAAFTDGWFVDSMPDLNQRNPHLATYLIQNNLWWIEYAGLSGLRIDTWS 398
                +   K A  +    F D  PDLN  NPH+   L++   +WI+  G+SG R+D   
Sbjct: 146 VQKSTWTFDKRARRWYFHRFYDFQPDLNTSNPHVQAELLKIMGFWIQ-LGVSGFRMDAVP 204

Query: 399 Y-------------SDKHFLKAFSE---------AIMAE---YPHFNM--VGEEWSGNPA 431
           +                  L+ F E          I+AE    P+ ++   G+E    P 
Sbjct: 205 FVIATKGPKVRKPVEQYDMLRTFREFLQWREGDAIILAEANVLPNTDLQYFGDEGERLPM 264

Query: 432 VVSYWQRAKQNPDGYQTSLPGLMDFPLYEVLL--QAVNEEERWGTGLIRLYEALANDMLY 489
           + ++    + N + + T   G    PL E LL  +      +WG   +R ++ L    L 
Sbjct: 265 MFNF----QVNQNTFYTLATGDTK-PLKEALLATKPRPSSAQWGV-FLRNHDELDLGRLT 318

Query: 490 PHAQNLVL----------FEGNHDTNRLYSLLGRDMNKFKLALAYVLLSNRVPQIFYGTE 539
           P  ++ V             G     RL  +L  D  + +LA + +L     P   YG E
Sbjct: 319 PRQRSEVFAAFAPESDMQLYGRGIRRRLAPMLAGDRRRLELAYSLMLSLPGTPVFRYGDE 378

Query: 540 FAM 542
             M
Sbjct: 379 IGM 381