Pairwise Alignments

Query, 366 a.a., LacI family transcription regulator (RefSeq) from Shewanella amazonensis SB2B

Subject, 331 a.a., ribose operon transcriptional repressor RbsR from Pectobacterium carotovorum WPP14

 Score =  140 bits (354), Expect = 4e-38
 Identities = 102/339 (30%), Positives = 173/339 (51%), Gaps = 17/339 (5%)

Query: 27  ATSIDIAYRAGVSQSTVSRALRDSPLVSPETKEKIRAIARELNYKVDKNASNLRTQNSHT 86
           AT  D+A  AGVS STVS  + ++  VS   +EK+     +LNY     A +L+   + T
Sbjct: 2   ATMKDVARLAGVSTSTVSHVINNNRFVSDTIREKVMKAVEDLNYAPSALARSLKINQTRT 61

Query: 87  LALLLCEDPTNDDSLINPFFLSMLGSITRATAKQGYDLLVSFQQLSSDWHADYEDS---N 143
           + +LL           NPF+  ++  + R   ++GY L++   +   D  +   ++    
Sbjct: 62  IGMLLTASN-------NPFYAEVVRGVERCCYERGYSLILCNTEGDRDRMSHSLETLLQK 114

Query: 144 KADGIILLGYGDFVDYEHKLERLLAQNTHFVIWGAEHNKSTVASVGCDNQQ-GGLIATEH 202
           + DG++L+   +       + R  +     + W        V  V  DN   GG IAT +
Sbjct: 115 RVDGVLLMCTENHRPLPEMMSRYPSIPMVMMDWAPFEG---VMDVIKDNSLLGGEIATNY 171

Query: 203 LLSLGRKSVAFLGDASSHSPEFRDRYLGHVRALKDAGLVADKRCQVDAISTESAGFDAAN 262
           L+S G K +A +      +  + +R  G+ +A++ AGL      ++       AG+ A  
Sbjct: 172 LISRGYKKIACIAGPKDKTTAY-NRLEGYRQAMQLAGLFIPADYEIFGDFEFEAGYRAMQ 230

Query: 263 KLIRKGAQFDAIFAASDLIAIGAIRALKEAGLRVPEDVAVVGYDDIPVASFANPPLTTIK 322
           +L+    + +A+FA++D +A+G   AL +AGL +P+D+AV+GYDDI +A + +PPLTT+ 
Sbjct: 231 QLLALEDKPEAVFASNDAMAVGVYHALYQAGLSIPQDMAVIGYDDIELARYMSPPLTTVH 290

Query: 323 QNTQLAGEMLVESLL-KLIHGEAVPPRLIPT-SLVVRKS 359
           Q     GE+ V++LL +L H    P  L+ T  L+VR+S
Sbjct: 291 QPKDELGELAVDTLLYRLEHPNTEPNALVLTPELMVRQS 329