Pairwise Alignments

Query, 366 a.a., LacI family transcription regulator (RefSeq) from Shewanella amazonensis SB2B

Subject, 329 a.a., Ribose operon repressor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  135 bits (341), Expect = 1e-36
 Identities = 93/319 (29%), Positives = 155/319 (48%), Gaps = 14/319 (4%)

Query: 31  DIAYRAGVSQSTVSRALRDSPLVSPETKEKIRAIARELNYKVDKNASNLRTQNSHTLALL 90
           D+A  AGVS STVS  +     VS    EK+ A  + LNY     A +L+   + T+ +L
Sbjct: 3   DVARLAGVSTSTVSHVINKDRFVSETITEKVEAAIKSLNYAPSALARSLKLNQTRTIGML 62

Query: 91  LCEDPTNDDSLINPFFLSMLGSITRATAKQGYDLLV---SFQQLSSDWHADYEDSNKADG 147
           +           NPF+  ++  + R+  ++GY L++      +   + + +     + DG
Sbjct: 63  ITAST-------NPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDG 115

Query: 148 IILLGYGDFVDYEHKLERLLAQNTHFVIWGAEHNKSTVASVGCDNQQGGLIATEHLLSLG 207
           ++LL           +ER  +  T  + W     +     +  ++  GG +AT++L+  G
Sbjct: 116 LLLLCTETHQPSREIMERYPSIPTVMMDWSPFDGEGDSDLIQDNSLLGGDLATQYLIDKG 175

Query: 208 RKSVAFLGDASSHSPEFRDRYLGHVRALKDAGLVADKRCQVDAISTESAGFDAANKLIRK 267
              +A +      +P  R R  G+  A+K AGL   +  ++        GFDA   L+  
Sbjct: 176 FTRIACITGPLDKTPA-RLRLEGYRAAMKRAGLAIPQGYEITGDFEFGGGFDAMQALLAH 234

Query: 268 GAQFDAIFAASDLIAIGAIRALKEAGLRVPEDVAVVGYDDIPVASFANPPLTTIKQNTQL 327
             +  A+F  +D +A+GA +AL +AGLR+P+D+ V+GYDDI +A +  PPLTTI Q    
Sbjct: 235 QQRPQAVFTGNDAMAVGAYQALYQAGLRIPQDMVVIGYDDIELARYMTPPLTTIHQPKDE 294

Query: 328 AGEMLVESLLKLIHGEAVP 346
            GE+ ++    LIH  A P
Sbjct: 295 LGELAID---VLIHRMAQP 310