Pairwise Alignments

Query, 393 a.a., topoisomerase IV, subunit B (RefSeq) from Shewanella amazonensis SB2B

Subject, 386 a.a., conserved exported protein of unknown function from Pseudomonas putida KT2440

 Score = 83.6 bits (205), Expect = 9e-21
 Identities = 106/407 (26%), Positives = 164/407 (40%), Gaps = 46/407 (11%)

Query: 7   AATIAALMATPAAWA----EIQINGFASI-VAGSSLDDDESLFGYDSEIDF----NQNTK 57
           A  IA L+AT  A A    + Q NGF +  +     +D    FG   +       +Q ++
Sbjct: 6   ALGIAGLIATTPAMALDQGDYQFNGFGTAGLTHLGGEDKGRSFGISGQTTDAWRGDQLSR 65

Query: 58  FAVQVAADLGGGLRATAQ-LLSRGRDDYDVEFEWAYLSYDITDNLMLMAGRQRFNLYKYS 116
              Q+   L   L  T Q  L   +D +    EWAYLS+  T+ L +  GR R  +Y YS
Sbjct: 66  LGGQLQYGLTDTLGVTVQGTLKPEQDTWKGNLEWAYLSWKATEGLTVRVGRLRLPIYMYS 125

Query: 117 DYIDVGFAYHWIMPPQGVYS-LPFSSGEGIGLVYSTLWGDTDVG-VTYKYITSSKEDFVP 174
           + +DVG  + W+  P  VYS +  S+ EG   +Y+   G   +G VT++       +   
Sbjct: 126 ETLDVGVTHPWLRLPDEVYSQVQLSNYEGADALYTVTTG---IGSVTFQVAGGQAANRNL 182

Query: 175 SGTDITPAPFSAKGHILNLNFTTGDFEYGLNLGYV-SDLTYEYPDLLALAAAVESTGLFP 233
              D        K    N++  T DF   L LGY  +D+         L+A+V + G  P
Sbjct: 183 FAMDDLYDIDYKKIFAANVSLETYDFGT-LRLGYAEADIDTN------LSASVVAPGGSP 235

Query: 234 EQTVNDILPID-DSATIIGVHGKYDPGNWFILAEYTRLDLDPSAFALQDSAFVSGGIRFG 292
            Q   D L ++        +  +YD G W    E+T  + +       D+ ++ GG RFG
Sbjct: 236 TQV--DFLSLNRKKGGFASIGYQYDNGTWVSSNEWTSNNTEGDQQGSIDAFYLMGGRRFG 293

Query: 293 AVTLHATYGWDENKPQYEALDAMLPVYNALPPAAQPQVAPLIGLTQMALETQQQDSYYYT 352
              LH TY   +     ++       YN  P               + L+ + +      
Sbjct: 294 DALLHLTYAQLDEDAGRQSSWTYGMNYNLAP--------------NLVLKGEYKRVDTRG 339

Query: 353 LGMRWDFHSSAAFKVEYTDFTNDKGPAT------DGQVLLMGVDLVF 393
            G R  F  +A    ++  F    G A       DG ++ +GVD VF
Sbjct: 340 NGYRGTFVQNAQETFDHAVFAASNGTAGTPSRNYDGDIVSVGVDFVF 386