Pairwise Alignments

Query, 606 a.a., excinuclease ABC subunit C (RefSeq) from Shewanella amazonensis SB2B

Subject, 607 a.a., UvrABC system protein C from Pseudomonas lactucae CFBP13502

 Score =  612 bits (1579), Expect = e-179
 Identities = 308/601 (51%), Positives = 420/601 (69%), Gaps = 5/601 (0%)

Query: 2   FDHKAFLKTVSSASGVYRMYDAAAEVIYVGKAKDLKKRLSSYFRTNLPNIKTQALVSNIA 61
           FD  AFL T S   GVYRM+D+ A ++YVGKAK+LK RL+SYFR +    KT ALV+ IA
Sbjct: 5   FDPSAFLSTCSGRPGVYRMFDSEARLLYVGKAKNLKNRLASYFRKSGLAPKTAALVARIA 64

Query: 62  NIDVTLTHSETEALILENDYIKQYMPKYNVLLRDDKSYPYILLSGHKHPRLAYHRGAQRE 121
            ++ T+T +ETEAL+LE   IK++ P YN+LLRDDKSYPY+ LS    PRL+ HRGA++ 
Sbjct: 65  QVETTITANETEALLLEQTLIKEWRPPYNILLRDDKSYPYVFLSDGDFPRLSIHRGAKKA 124

Query: 122 KGEYFGPYPNGGAVRESLNLMQKLFPIRQCEDAYYRARSRPCLQYQIGRCSAPCVGKISD 181
           KG+YFGPYP+ GA+RESL+L+QK F +RQCED++Y+ R+RPCLQYQI RC APCVG +  
Sbjct: 125 KGKYFGPYPSAGAIRESLSLLQKTFFVRQCEDSFYKNRTRPCLQYQIKRCKAPCVGLVDS 184

Query: 182 EDYDEQVRLATLFLRGKDQQVIASLVGKMEAAALAMEYEAAARYRDQIQALRKVAEQQNV 241
            +Y E VR + +FL G+   +   L   ME AA  +++E AA  RDQI  LR+V +QQ++
Sbjct: 185 AEYAEDVRHSVMFLEGRSNALTDELSSAMEQAAGTLDFERAAELRDQISLLRRVQDQQSM 244

Query: 242 SGQQGDMDVIGVNYASGIACFHILFIREGKIFGSRSYFPAVPDATELGEVLRAFMLQFYL 301
            G  GD+DVI      G AC H++ +R G++ GS+++FP      ++ EV+ AF+ Q+Y+
Sbjct: 245 EGGTGDVDVIAAFVNPGGACVHLISVRGGRVLGSKNFFPQTGIDEDVAEVMAAFLGQYYV 304

Query: 302 GNEAHRSIPKEVLLGEEFEDLHELEAAMQDSLGHRLEIKTKVRADRAAFLRLANTNAANA 361
            +   R +P E+++    ED   L  A+ +  G  L+I  +VR  RA + +LA TNA  A
Sbjct: 305 -SSPERDLPSELIVNVVHEDFPTLIEAIHELRGRELDISHRVRGTRARWQQLAVTNAEQA 363

Query: 362 VVTKLAHKSTVEQRMELLEEVLGLGAPIQRMECFDISHTMGESTVASCVVFNREGPNKGE 421
           +  +LA++  V  R + L EVL L  P QR+EC+DISH+ GE+TVASCVVF  EGP K +
Sbjct: 364 LSARLANRQHVAARFDALAEVLKLEEPPQRLECYDISHSSGEATVASCVVFGPEGPIKSD 423

Query: 422 YRRYNISGITGGDDYAAMAQALSRRFDKI-ERTGKVPDVLFIDGGLGQLRAAMTIVNDKF 480
           YRRYNI G+T GDDYAAM QAL+RRF K+ +  GK+PD+L +DGG GQL  A  ++N+  
Sbjct: 424 YRRYNIEGVTAGDDYAAMHQALTRRFSKLKDGEGKLPDILLVDGGKGQLSMARDVLNELA 483

Query: 481 AELDRQPLLVGVAKGESRKPGLETLIFGGSEAEFSLESDNPALHLIQHIRDESHRFAITG 540
                  +L+GVAKG +RK G ETL    +  EF+L+ D+PALHLIQ IRDE+HRFAITG
Sbjct: 484 VP---DLILLGVAKGATRKAGFETLYLNDAAHEFTLKGDSPALHLIQQIRDEAHRFAITG 540

Query: 541 HRAKRQQTRNTSTLESIPGIGPKRRKALLQYLGGLQQVKNASVAELAKVPGISAEMAQTI 600
           HRA+R +TR TSTLE + G+GP RR+ LL++ GGLQ++  AS+ E+AK PGIS ++A+ I
Sbjct: 541 HRARRGKTRRTSTLEGVAGVGPTRRRDLLKHFGGLQELSRASIDEIAKAPGISKKLAELI 600

Query: 601 H 601
           +
Sbjct: 601 Y 601