Pairwise Alignments

Query, 708 a.a., 23S rRNA m(2)G2445 methyltransferase (RefSeq) from Shewanella amazonensis SB2B

Subject, 756 a.a., 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) from Pseudomonas fluorescens GW456-L13

 Score =  572 bits (1475), Expect = e-167
 Identities = 315/753 (41%), Positives = 429/753 (56%), Gaps = 51/753 (6%)

Query: 2   FNFFAAAPKGFEYALAKELETLGAENVRESVAGVYFSASLAQGYQITLWTRLASRIVLIL 61
           F  F   PKG E  L +E   LG E  RE  + V   A++   Y++ LW+RLA+R++L+L
Sbjct: 5   FELFLTCPKGLEGLLIEEAVGLGLEEAREHTSAVRGMATMETAYRLCLWSRLANRVLLVL 64

Query: 62  FTGECQSAEQLYNAAYTIDWPSHFSNRSTFSIDFHGTGGFINNSQFGALKIKDAVVDRFR 121
              + + AE LY+    I+W  H  N  T +++F G G  I+N+ FGALK+KDA+VD+ R
Sbjct: 65  KRFQMKDAEDLYHGVLDIEWQDHMLNDGTLAVEFSGHGSGIDNTHFGALKVKDAIVDKLR 124

Query: 122 DDDLSRPDVVKGHPDMRIDAHYGRGKITIGINFSGAALHQRGYRGNTGEAPLKENLAANM 181
                RP + K +PD+RI     RG+  + ++ SG +LHQRGYR   G APLKENLAA +
Sbjct: 125 TPQGDRPSIDKLNPDLRIHLRLDRGEAILSLDLSGHSLHQRGYRLQQGAAPLKENLAAAI 184

Query: 182 LYRSGW---ADNPVTLLDPFCGSGTVLIEAALMACDIAPGLMRERFGFEHWRRHDQALWQ 238
           L RSGW   A     L DP CG GT L+EAA++A D+AP L RE++GF  W  H  ALW+
Sbjct: 185 LIRSGWPRIAAEGGALADPMCGVGTFLVEAAMIAADMAPNLRREQWGFTAWLGHVPALWK 244

Query: 239 QVIEEAKARASLGKTRCQLKFYGSDIDSRVVALAKRNANSAGVFDFIDFKVANALNLEPP 298
           ++ EEA  RA+ G  +  L   G + D R++   + N   AG+ ++I          EP 
Sbjct: 245 KLHEEATERAAAGLAKPPLWIRGYEADPRLIQPGRNNVERAGLSEWIKIYQGEVATFEPR 304

Query: 299 VAE---GMVLTNPPYGERLGNVTSLLQLYFQLGEKFKQSYGGWKLGLLCSDMELVSSLKL 355
             +   G+V+ NPPYGERLG+  SLL LY  LGE+ +Q+   W+  +     +L   + +
Sbjct: 305 PDQNQKGLVICNPPYGERLGDEASLLYLYQNLGERLRQACLNWEAAVFTGAPDLGKRMGI 364

Query: 356 KADKQMKMYNGALECAFNLYTL---------HATSTRRDI-------------------- 386
           ++ KQ   +NGAL C   L  +           T  +R +                    
Sbjct: 365 RSHKQYSFWNGALPCKLLLIKVLPDQFVTGERRTPEQRQVEREQAAYDQAPNEPQERKFN 424

Query: 387 -------------PVDTTGQGGEIAAPFANRLKKNLKQLEKWAKREGIDSYRLYDADIPE 433
                        PV    +  E    FANRL+KNLK L KW KREGID YR+YDAD+PE
Sbjct: 425 KNGNPIKPAPAPAPVVEQPRLSEGGQMFANRLQKNLKALGKWVKREGIDCYRVYDADMPE 484

Query: 434 YNVAVDRYLDYVVVQEYAAPSAIPEAVTKRRLTDVLLALPRALGIDPDKIVLKTRERQKG 493
           Y++A+D Y D+V VQEY AP +I       R+ D L A+P+AL ID  ++V+K RERQ G
Sbjct: 485 YSMAIDLYHDWVHVQEYVAPKSIDPEKASARMFDALAAIPQALNIDKSRVVVKRRERQSG 544

Query: 494 TNQYQKLDGEKLELVTTEYGCSFKLNLTDYLDTGLFLDHRLTRKLVGEKAKNRDVLNLFA 553
           T QY++   +   +   E G    +NLTDYLDTGLFLDHR  R  + ++A  +  LNLF 
Sbjct: 545 TKQYERQAAQGKFVEVNEGGVKLLVNLTDYLDTGLFLDHRPMRMRIQKEAAGKRFLNLFC 604

Query: 554 YTGSASVHAGKGGAKSVTTVDMSNTYLNWAKDNFMLNGLIGRQYQFEQADCLQWIRDCER 613
           YT +ASVHA KGGA+S T+VD+S TYL+WA+ N  LNG   +  + EQ D + W+     
Sbjct: 605 YTATASVHAAKGGARSTTSVDLSKTYLDWARRNLSLNGFSDKN-RLEQGDVMAWLEASRD 663

Query: 614 QFDLIFIDPPTFSNSKRMEDSFDVQRDHVDLLASLKKLLRPGGEIVFSNNKRKFKMDMEA 673
           ++D+IFIDPPTFSNSKRME  FDVQRD V L+      L PGG + FSNN RKF  ++EA
Sbjct: 664 EYDMIFIDPPTFSNSKRMEGVFDVQRDQVQLIDLAMARLAPGGVLYFSNNFRKF--ELEA 721

Query: 674 LAAAGLKAVNIDDKVLPMDYARNPQIHNCWVVT 706
                     I  + +  D+ARN +IH  W +T
Sbjct: 722 NLGERYAVEEITAQTIDPDFARNAKIHRAWKIT 754