Pairwise Alignments

Query, 148 a.a., IS1004 transposase (RefSeq) from Shewanella amazonensis SB2B

Subject, 180 a.a., IS200/IS605 family transposase from Escherichia coli ECRC99

 Score = 58.5 bits (140), Expect = 5e-14
 Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 1/132 (0%)

Query: 9   HVFYRCQYHLVWTPKYRYKILKGNLGKELYRSIYVYCNMKKCRVVELNVQEDHVHLVVRT 68
           H  +    HL +  +YR +I   +  ++L       C   +  +VE++ + DHVHL+   
Sbjct: 17  HCVFLMHVHLFFVTRYRRQIFDYDATEKLRTYFSNVCADFEAELVEMDGEPDHVHLLTNY 76

Query: 69  PPSLSVSDLMGFVKGRTAIRMFAKFPYLRKQKLWGNHFWQRRYFVDSV-GANEEIIRRYV 127
           PP L++S L+  +KG +   +    P +  +  +    W   YF  S  GA   +IR+Y+
Sbjct: 77  PPKLAISSLVNSLKGVSGRLLRRDRPDIAVRYYYKGVLWSPGYFASSCGGAPISVIRQYI 136

Query: 128 RHQEKTAKEEEK 139
             Q+   + E +
Sbjct: 137 EQQQTPGQVENR 148