Pairwise Alignments

Query, 358 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 421 a.a., AI-2E family transporter from Variovorax sp. OAS795

 Score =  121 bits (304), Expect = 3e-32
 Identities = 88/347 (25%), Positives = 162/347 (46%), Gaps = 48/347 (13%)

Query: 21  VVVILAGIKA---ASPIVVPFVLSAFIAVICNPVISWMMRFRVPKWLAVMLLMFFIVMLG 77
           V+ +LA + A   AS + +P +LS  ++   +P++  +  ++VP+W+        +++LG
Sbjct: 71  VLAVLASVFALRWASAVFIPLMLSLLLSYALSPLVDVLENWKVPRWIGAA-----VILLG 125

Query: 78  L-----WLATLVGSSINEFSKQLPHYRDQL-----------------IQQFGWILEKLQT 115
           L     W    +  S +E    LP    +L                 +QQ    LE+   
Sbjct: 126 LGGGLGWTGYSLSGSASELLDALPVAAQKLRQAARSDRNAAATPLDSVQQAAAQLERAAE 185

Query: 116 LN-----IRISKEQVLAYFDPGMALSMTTNMLSGVGNVMANLFLIILTIVFMLFEAQSLP 170
            N      R    +V+    P        +   G+ + M  L L+     F L    +  
Sbjct: 186 ENSARVAARKGVARVVIERPPFNVREYLWSGTVGLLSAMGQLTLVAFLTFFALCSGNTFR 245

Query: 171 KKVHLALDDPEMRLQQI-----DKFLHSVNQYMVIKTLVSLATGAVVGIGLAAIGVDYAL 225
           +K+ + +  P ++ ++I     D    ++ +Y++++ L S+  G   G+    +G+D A 
Sbjct: 246 RKL-IKITGPSLQKKKITVHVLDDITKNIERYLLVQILTSILVGVATGLAFWFLGLDNAA 304

Query: 226 LWAVIAFLFNYIPNIGSIIAAIPAILLAFIQLGPAAAGGTALLYLGTNMVM----GNVIE 281
           +W ++A + N +P IGS+I    A L+AF+Q      G   LL  GT++V+    GN++ 
Sbjct: 305 VWGIVAAVTNLMPYIGSVIVMAAAGLVAFVQFNTIEMG---LLVAGTSLVIHTLVGNLLV 361

Query: 282 PKFMGRGLGLSTLVVFLSLIFWGWLLGSVGMLLSVPLTMIVKIALER 328
           P    R   ++ + VF+ +IFWGWL G  G+LL +P+TM++K   +R
Sbjct: 362 PWLTSRTSRMNPVAVFVGVIFWGWLWGVWGLLLGIPITMVIKSICDR 408