Pairwise Alignments

Query, 358 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 356 a.a., AI-2E family transporter from Ralstonia solanacearum UW163

 Score =  105 bits (262), Expect = 2e-27
 Identities = 85/340 (25%), Positives = 160/340 (47%), Gaps = 32/340 (9%)

Query: 13  RGFAIMAFVVVILAGIKAASPIVVPFVLSAFIAVICNPVISWMMRFRVPKWLAVMLLMFF 72
           R  A +A  V+ LA +K  +P + PFV +  ++ I +P + W+ R RVP+ L V L++  
Sbjct: 12  RTLAWIAVAVIFLALLKLLAPTLTPFVFAFILSYILHPGVEWLQRHRVPRVLGVFLMVLL 71

Query: 73  IVMLGLWLATLVGSSINEFSKQLPHYRDQLIQQFGWILEKLQTLNIRISKEQVLAYFD-P 131
           + ++ + L  L+   +    +++P  R+QL    G + +    +  R+++  V   FD P
Sbjct: 72  LAVMAVALMLLI---LAVLQREIPAIREQLP---GMLSKLNAAVTPRLAEMGVHVRFDFP 125

Query: 132 GMALSMTTNMLSGVGNVMAN------------------LFLIILTIVFMLFEAQSLPKKV 173
           G+   +T  + S   +VM+                   +FL+ + + ++L +   L +++
Sbjct: 126 GLRKLLTEQLASSPEDVMSTALNYLRVSGSAAVQLLGIVFLVPIVMFYLLMDWNMLMRRL 185

Query: 174 HLALDDPEMRLQQIDKFLHS----VNQYMVIKTLVSLATGAVVGIGLAAIGVDYALLWAV 229
              +  P   + +  +        ++QY+  + +V L        GLA  G D AL   +
Sbjct: 186 EGVV--PRHWIGKTRELATETDGLLSQYLRGQIIVMLVLAVYYSSGLALAGFDVALPIGI 243

Query: 230 IAFLFNYIPNIGSIIAAIPAILLAFIQLGPAAAGGTALLYLGTNMVM-GNVIEPKFMGRG 288
              L  +IP IG  I    AIL A +Q G         +  G   V+ G  + P+ +G  
Sbjct: 244 FTGLAVFIPYIGFGIGLTLAILSALLQFGNLYGLLAVAVVYGIGQVLEGFYLTPRLVGER 303

Query: 289 LGLSTLVVFLSLIFWGWLLGSVGMLLSVPLTMIVKIALER 328
           +GL  L V L+L+ +G L G  G+LL++P++ ++ + L +
Sbjct: 304 IGLHPLAVILALLAFGQLFGFFGILLALPISAVLLVGLRQ 343