Pairwise Alignments

Query, 358 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 358 a.a., AI-2E family transporter from Paraburkholderia sabiae LMG 24235

 Score =  105 bits (262), Expect = 2e-27
 Identities = 86/344 (25%), Positives = 157/344 (45%), Gaps = 46/344 (13%)

Query: 13  RGFAIMAFVVVILAGIKAASPIVVPFVLSAFIAVICNPVISWMMRFRVPKWLAVMLLMFF 72
           R F  +A  + +   +   SP++ PF+L A +A I  P ++WM R RVP+ LA ML++ F
Sbjct: 14  RAFIWLAIALAVGILLWLLSPVLTPFLLGAILAYILQPGVAWMTRRRVPRGLAAMLMILF 73

Query: 73  IVMLGLWLATLVGSSINEFSKQLPHYRDQLIQQF----GWILEKLQTLNIRIS------K 122
            V +   L  LV   +    K++P  + Q+   F    GW+  KL  L +  +      +
Sbjct: 74  FVAIVTLLVLLV---LGVIQKEVPQLKQQVPVFFSHLHGWLTPKLAILGVNDALDFASIR 130

Query: 123 EQVLAYFDPG---MALSMTTNMLSGVGNVM----ANLFLIILTIVFMLFEAQSL------ 169
           + V+   +     +AL   T++ +   NVM     N+ ++ L + ++L++  ++      
Sbjct: 131 DMVMGQLEGSAQTVALYAWTSIRTS-SNVMITLIGNVVMVPLVLFYLLYDWNAMLARVRG 189

Query: 170 -------PKKVHLALDDPEMRLQQIDKFLHSVNQYMVIKTLVSLATGAVVGIGLAAIGVD 222
                   K +HLA D             H ++QY+  + LV         + L   G +
Sbjct: 190 FIPRRWFAKTIHLARD-----------MDHMLSQYLRGQLLVMGVLAVFYAVALYIAGFE 238

Query: 223 YALLWAVIAFLFNYIPNIGSIIAAIPAILLAFIQLGPAAAGGTALLYLGTNMVMGN-VIE 281
            AL   +   L  +IP IG       A++ A +Q G     G   +  G   ++ +  + 
Sbjct: 239 IALPVGIFTGLAVFIPYIGFATGLGLALVAALLQFGNWYGFGAVAIIYGVGQILESFFLT 298

Query: 282 PKFMGRGLGLSTLVVFLSLIFWGWLLGSVGMLLSVPLTMIVKIA 325
           P+ +G  +GL  L V  +L+ +G L G  G+L+++P++ I+ +A
Sbjct: 299 PRLVGERIGLHPLAVIFALLAFGQLFGFFGVLIALPVSAILSVA 342