Pairwise Alignments

Query, 358 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 633 a.a., AI-2E family transporter from Paraburkholderia sabiae LMG 24235

 Score =  132 bits (331), Expect = 3e-35
 Identities = 90/360 (25%), Positives = 175/360 (48%), Gaps = 35/360 (9%)

Query: 16  AIMAFVVVILAGIKAASPIVVPFVLSAFIAVICNPVISWMMRFRVPKWLAVMLLMFFIVM 75
           +++ FVVV+  G+  A  +++P  L+  ++ +  P++S + R    +  ++ + +   V+
Sbjct: 28  SVITFVVVV-CGLYFAREVLIPITLAVLLSFLLAPLVSLLRRLHFGQLPSIFVAVLTAVV 86

Query: 76  LGLWLATLVGSSINEFSKQLPHYR-----------DQLIQQFGWILEKLQTLNIRISKEQ 124
             L ++TL+G+ + + +  LP Y+           ++ + +   +L +      R++ E+
Sbjct: 87  TLLAVSTLIGAQVAQLAGSLPQYQAAIERKVETVQEKTVGRADALLSRAAAALARVAPER 146

Query: 125 VLAYFDPGMA--------------------LSMTTNMLSGVGNVMANLFLIILTIVFMLF 164
                + G +                    L +   + S V   +  +F++++  +F+L 
Sbjct: 147 ETPPHEAGRSQKPTVAAPLPVEVHEPIPSPLEVAQRVFSPVVGPLETMFIVLVVTIFILL 206

Query: 165 EAQSLPKKVH--LALDDPEMRLQQIDKFLHSVNQYMVIKTLVSLATGAVVGIGLAAIGVD 222
           + + L  ++       D       I+     +++Y V +  V+L  GA + IGLA IGV 
Sbjct: 207 QREDLRDRLIRLFGARDLHRTTTAINDAASRLSRYFVAQLGVNLGAGATIAIGLAIIGVP 266

Query: 223 YALLWAVIAFLFNYIPNIGSIIAAIPAILLAF-IQLGPAAAGGTALLYLGTNMVMGNVIE 281
            ALL+ V+  L  ++P IG+ IA + A++LA  IQ     A  T +L++  ++V G V+E
Sbjct: 267 GALLFGVLTALLRFVPYIGTWIAGLLAVILAAAIQPQWTMAVWTIVLFVTIDVVAGQVVE 326

Query: 282 PKFMGRGLGLSTLVVFLSLIFWGWLLGSVGMLLSVPLTMIVKIALERSSSGRWLAILLAD 341
           P   G   GLS L V ++ IFW WL G +G++LS PLT+ +          ++L +LL D
Sbjct: 327 PLLYGHSSGLSPLAVVVAAIFWSWLWGPIGLVLSTPLTLCLVTLGRYGERLKFLTVLLGD 386