Pairwise Alignments

Query, 358 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 358 a.a., AI-2E family transporter from Magnetospirillum magneticum AMB-1

 Score = 92.8 bits (229), Expect = 1e-23
 Identities = 89/332 (26%), Positives = 161/332 (48%), Gaps = 23/332 (6%)

Query: 34  IVVPFVLSAFIAVICNPVISWMMRFRVPKWLA--VMLLMFFIVM-LGLWL-ATLVGSSIN 89
           +++PFV    +A   +P+   M R  + + LA  ++ L+FF VM LGL L A ++   + 
Sbjct: 27  VMLPFVAGMAVAYFLDPLADRMERAGLSRTLATAIICLVFFGVMGLGLTLLAPIIQQQVV 86

Query: 90  EFSKQLPHYRDQLIQQFGWILEKL------QTLNIRISKEQVLAYFDPGMALSMTTNMLS 143
            F +++P Y   L  +   +LE++      + L    S     A    G  L +   +LS
Sbjct: 87  TFVQKVPVYAQSLQTRAMPLLEEVYRHLSPEDLEKLRSSAGAYAGTAVGWGLGVLKGVLS 146

Query: 144 GVGNVMANLFLIILTIV---FMLFEAQSLPKKVHLAL-----DDPEMRLQQIDKFLHSVN 195
           G   VM+ L L+ +T V   ++L +   +  KV   L     +     L++ID+   ++ 
Sbjct: 147 GGIAVMSILSLLFITPVVTFYLLRDWDHMVAKVDNWLPRHHAETIRFELREIDR---TIA 203

Query: 196 QYMVIKTLVSLATGAVVGIGLAAIGVDYALLWAVIAFLFNYIPNIGSIIAAIPAILLAFI 255
            ++  +  V +      G+GL   G+D  L+  +   L  ++P +G +I  I ++ LA  
Sbjct: 204 GFVRGQATVCIVLAIFYGVGLTITGLDLGLMIGLGTGLGAFVPYVGMLIGLIASVGLALA 263

Query: 256 QLGP-AAAGGTALLYLGTNMVMGNVIEPKFMGRGLGLSTLVVFLSLIFWGWLLGSVGMLL 314
           Q G     GG  +++L  N++ GN + PK +G  +GL  + +  SL+  G L G VG+LL
Sbjct: 264 QGGEWHLLGGVGIVFLIGNVLEGNFLTPKLVGDRVGLHPVWIIFSLLAGGALFGFVGILL 323

Query: 315 SVPLTMIVKIALERSSSGRWLAILLADDVDSE 346
           +VP   ++ + L R +   ++   L D V+ +
Sbjct: 324 AVPAASVIGV-LTRFALQNYMKSSLYDGVEDD 354