Pairwise Alignments

Query, 588 a.a., succinate dehydrogenase flavoprotein subunit (RefSeq) from Shewanella amazonensis SB2B

Subject, 602 a.a., fumarate reductase (quinol) flavoprotein subunit from Escherichia coli ECOR38

 Score =  415 bits (1067), Expect = e-120
 Identities = 245/600 (40%), Positives = 355/600 (59%), Gaps = 45/600 (7%)

Query: 9   DAVVIGAGGAGMRAALQISKEGKSC--ALLSKVFPTRSHTVSAQGGITVALGNAHEDNWE 66
           D  ++GAGGAG+RAA+  ++   +   AL+SKV+P RSHTV+A+GG + A+   H D++E
Sbjct: 7   DLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGG-SAAVAQDH-DSFE 64

Query: 67  YHMYDTVKGSDFIGDQDAIEYMCQTGPEAIIELEHMGLPFSRFENGKIYQRPFGGQSKNF 126
           YH +DTV G D++ +QD ++Y     P  + +LE  G P+SR  +G +  R FGG     
Sbjct: 65  YHFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGM---- 120

Query: 127 GGEQAARTAAAADRTGHALLHCLYQQNVK-NKTQVFSEWYALDLVKNEDGAIVGCTAIDI 185
              +  RT  AAD+TG  +LH L+Q +++  + Q F E + LD++  +DG + G  A+++
Sbjct: 121 ---KIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILV-DDGHVRGLVAMNM 176

Query: 186 ESGEIVYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMAYRAGVQLQDMEMWQFHPTG 245
             G +V  +A A V+ATGGAGR+Y   TN  I TGDG+GMA   GV L+DME  Q+HPTG
Sbjct: 177 MEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALSHGVPLRDMEFVQYHPTG 236

Query: 246 IAGAGVLVTEGCRGEGGYLLNKDGERFMERYA---------PNAK--DLASRDVVARSMM 294
           + G+G+L+TEGCRGEGG L+NK+G R+++ Y          P  K  +L  RD V+++  
Sbjct: 237 LPGSGILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFW 296

Query: 295 TEIREGRGCDGPMGPHIKLKLDHLGKETLEARLPGVCELSRTFAHIDPADGPIPVIPTCH 354
            E R+G     P G  + L L HLG++ L  RLP +CEL++ +  +DP   PIPV PT H
Sbjct: 297 HEWRKGNTISTPRGDVVYLDLRHLGEKKLHERLPFICELAKAYVGVDPVKEPIPVRPTAH 356

Query: 355 YMMGGLPTKVSGQVIRKNDDGSETDIVGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRA 414
           Y MGG+ T          D   ET I GLFAVGE + V +HGANRLG NSL +LVVFGR 
Sbjct: 357 YTMGGIET----------DQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRL 406

Query: 415 AGQHLGKALDETADPKAATDADIEQSLA----RLKRWESNKDGEDPAQIRKDLQMCMQLN 470
           AG+   +A++  +      DA I   +A    RLK   +   GE+ A+IR ++ M M+  
Sbjct: 407 AGE---QAMERASTAGNGNDAAINAQVAGVEQRLKDLVNQDGGENWAKIRDEMGMAMEEG 463

Query: 471 FSVFRTGEAMAEGLEQLQAIRKRLENAKLSDNSKEFNTQRIECLELDNLMATAIATAYAA 530
             ++RT E M + +++L  +++R +  +++D S  FNT  +  +EL + +  A   A++A
Sbjct: 464 CGIYRTPELMQKTIDKLAELQERFKRVRITDTSSVFNTDLLYTIELGHGLNVAECMAHSA 523

Query: 531 NFRTESRGAHSR--EDFTERDDDNWLCHSLFDPVTEAMSKREVNMSPKHREAFPPKKRTY 588
             R ESRGAH R  E  TERDD N+L H+L     +A     +  S       PP KR Y
Sbjct: 524 MARKESRGAHQRLDEGCTERDDVNFLKHTL--AFRDADGTTRLEYSDVKITTLPPAKRVY 581